Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 HIGD1AP14-201ENST00000507617 282 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 HMGN1P9-201ENST00000515212 298 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 IGKV2D-38-201ENST00000518423 240 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC022882.1-201ENST00000532142 501 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 MIR4301-201ENST00000577203 66 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 UBE2L4-201ENST00000587688 464 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC016727.2-201ENST00000603988 621 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 AC104695.3-201ENST00000604052 296 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 AC018462.2-201ENST00000605375 395 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC092608.2-201ENST00000624427 218 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RNF144AP50876 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 HSPA8P18-201ENST00000439846 1928 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF144AP50876 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 AL512329.1-201ENST00000404600 1592 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC112243.1-201ENST00000623949 3851 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF144AP50876 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF144AP50876 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC119674.1-204ENST00000641348 1343 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 WBP11P1-201ENST00000562560 1931 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC244517.1-201ENST00000606030 2086 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 CASC19-204ENST00000641001 2055 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AC105114.1-201ENST00000624795 1862 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 Y_RNA.167-201ENST00000363735 109 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 RNU6-1029P-201ENST00000384109 107 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 RNU6-890P-201ENST00000384121 107 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AL391419.1-201ENST00000398901 1275 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 RN7SKP235-201ENST00000410662 305 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC008280.1-201ENST00000418851 412 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 AL645936.2-201ENST00000430565 928 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF144AP50876 MTND1P17-201ENST00000448961 204 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 AC025271.1-201ENST00000485045 429 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC079140.5-201ENST00000507882 310 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 TXNP6-201ENST00000510190 310 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AC090136.1-201ENST00000520009 240 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF144AP50876 AP000889.1-201ENST00000530968 660 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AC109635.4-202ENST00000531666 412 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF144AP50876 LSM3P2-201ENST00000551246 273 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AL137100.2-201ENST00000555786 315 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RNF144AP50876 SNORA70D-201ENST00000578836 135 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 MIR5682-201ENST00000584864 76 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 COX6CP16-201ENST00000603667 216 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AC104662.1-201ENST00000604448 511 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 ATP1B3P1-201ENST00000605365 821 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 uc_338.12-201ENST00000616344 181 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 AL354718.1-201ENST00000619764 589 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF144AP50876 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms