Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 SNORD113.2-201ENST00000364166 89 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 SNORD96B-201ENST00000386148 79 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PTPN9P43378 SNORA40.2-201ENST00000390847 128 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 OR4K6P-201ENST00000416478 897 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 ELOCP9-201ENST00000418624 239 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN9P43378 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 Z77249.1-201ENST00000444622 1175 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 CEACAMP6-201ENST00000452007 574 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 RPL10P17-201ENST00000453852 316 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN9P43378 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 BOLA3P3-201ENST00000505182 232 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 AC113430.1-201ENST00000506872 718 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN9P43378 MRPS36P3-201ENST00000519284 130 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 LINC00622-201ENST00000562811 1570 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.76□□□□□ -1.65
PTPN9P43378 SGO1P1-201ENST00000603525 1447 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AC025811.1-201ENST00000604312 472 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AC008966.2-201ENST00000606157 453 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AL161616.1-201ENST00000611867 286 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AC131238.1-201ENST00000617135 328 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AC013470.4-201ENST00000619978 986 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN9P43378 ATE1-AS1-202ENST00000636460 506 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.76□□□□□ -1.65
PTPN9P43378 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTPN9P43378 CPHL1P-201ENST00000461341 3407 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 AC005261.4-201ENST00000600047 1385 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.76□□□□□ -1.65
PTPN9P43378 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
PTPN9P43378 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN9P43378 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN9P43378 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN9P43378 MAPK10-303ENST00000641324 3959 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN9P43378 RNA5SP151-201ENST00000365632 117 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 RNU6-413P-201ENST00000384115 107 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN9P43378 MTND4P13-201ENST00000402078 1023 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 ERHP2-201ENST00000402323 299 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 RNU2-50P-201ENST00000410494 143 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN9P43378 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN9P43378 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN9P43378 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN9P43378 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN9P43378 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 RPL7P4-203ENST00000430239 730 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN9P43378 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN9P43378 TPTE2P6-202ENST00000445572 1007 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN9P43378 MRPL42P4-201ENST00000453267 443 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN9P43378 PRDX3P4-201ENST00000470828 747 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 RPL23AP65-201ENST00000475608 468 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC004263.1-201ENST00000479327 332 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 MTCYBP35-201ENST00000503630 1137 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC023632.1-201ENST00000518463 375 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 HMGB1P23-201ENST00000518743 568 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN9P43378 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.75□□□□□ -1.65
PTPN9P43378 UBTFL10-201ENST00000528532 562 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 CYCSP28-201ENST00000534284 321 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.75□□□□□ -1.65
PTPN9P43378 AC090888.2-201ENST00000559765 1144 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 NIFKP8-201ENST00000560500 874 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 BPTFP1-201ENST00000579209 492 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC015688.2-201ENST00000584523 262 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC061975.8-201ENST00000587058 721 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AP001269.3-201ENST00000588718 329 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 BPIFA4P-203ENST00000603168 689 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC007349.4-201ENST00000608114 532 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN9P43378 AC100827.5-201ENST00000615883 426 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms