Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL592295.2-201ENST00000612578 206 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AC091905.1-201ENST00000624400 311 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 AC087565.3-202ENST00000642085 1603 ntBASIC4.27□□□□□ -1.73
CASQ1P31415 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.26□□□□□ -1.73
CASQ1P31415 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CASQ1P31415 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CASQ1P31415 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 AL158163.1-201ENST00000603915 1649 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 RPL23AP59-201ENST00000399415 461 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 AC010740.1-201ENST00000417035 684 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.26□□□□□ -1.73
CASQ1P31415 AC079355.1-201ENST00000421770 223 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AL356387.2-201ENST00000422272 243 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.26□□□□□ -1.73
CASQ1P31415 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 SETP5-201ENST00000437270 562 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 SKP1P1-201ENST00000438081 489 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 MTCYBP31-201ENST00000438855 1122 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 HMGB1P37-201ENST00000439613 609 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 NPM1P49-201ENST00000448027 714 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 RN7SL826P-201ENST00000479724 288 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.26□□□□□ -1.73
CASQ1P31415 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 RNU6-1308P-201ENST00000516817 103 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 IGLVIV-65-201ENST00000517313 360 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.26□□□□□ -1.73
CASQ1P31415 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.26□□□□□ -1.73
CASQ1P31415 AL445222.1-201ENST00000607259 628 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AC005021.1-201ENST00000608730 355 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 MIR6768-201ENST00000610734 72 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.26□□□□□ -1.73
CASQ1P31415 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 AC116667.1-201ENST00000604855 2072 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CASQ1P31415 CCT8P1-201ENST00000413611 1657 ntBASIC4.26□□□□□ -1.73
CASQ1P31415 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CASQ1P31415 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.25□□□□□ -1.73
CASQ1P31415 AL590704.1-201ENST00000402856 794 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.25□□□□□ -1.73
CASQ1P31415 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CASQ1P31415 RPL21P109-201ENST00000422213 475 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 AL049610.1-201ENST00000423374 372 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.25□□□□□ -1.73
CASQ1P31415 AL157827.1-201ENST00000447622 132 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 RPL7P32-201ENST00000457119 744 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 AP000893.1-201ENST00000474462 794 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 RPS23P1-201ENST00000491662 432 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 AC026784.1-201ENST00000507986 352 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 RN7SKP83-201ENST00000516512 178 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.25□□□□□ -1.73
CASQ1P31415 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.25□□□□□ -1.73
CASQ1P31415 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.25□□□□□ -1.73
CASQ1P31415 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.25□□□□□ -1.73
CASQ1P31415 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.25□□□□□ -1.73
CASQ1P31415 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.25□□□□□ -1.73
CASQ1P31415 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CASQ1P31415 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.25□□□□□ -1.73
CASQ1P31415 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CASQ1P31415 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CASQ1P31415 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.25□□□□□ -1.73
CASQ1P31415 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CASQ1P31415 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
CASQ1P31415 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CASQ1P31415 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.24□□□□□ -1.73
CASQ1P31415 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CASQ1P31415 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CASQ1P31415 AL645927.1-201ENST00000396783 406 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.24□□□□□ -1.73
CASQ1P31415 ARL5AP2-201ENST00000444698 533 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 ARL2BPP10-201ENST00000446487 531 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 RPS3AP53-201ENST00000454716 778 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 RPL7P1-201ENST00000468161 747 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 RPL7P9-201ENST00000468715 747 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CASQ1P31415 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
CASQ1P31415 CCNHP1-201ENST00000513311 678 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 OR6C73P-201ENST00000546432 358 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.24□□□□□ -1.73
CASQ1P31415 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.24□□□□□ -1.73
CASQ1P31415 AL121576.1-201ENST00000556055 276 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CASQ1P31415 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.24□□□□□ -1.73
CASQ1P31415 MIR5684-201ENST00000585074 65 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.24□□□□□ -1.73
CASQ1P31415 PCNAP1-202ENST00000595299 752 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 AC090425.2-201ENST00000608818 501 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 AC245389.2-201ENST00000616023 576 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 AC243756.2-201ENST00000618406 463 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 AC242843.1-201ENST00000618702 573 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 OR56B2P-202ENST00000641377 2453 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms