Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC8P31273 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 ATP5F1P6-201ENST00000402768 767 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC8P31273 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC8P31273 AC009237.10-201ENST00000414112 510 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AC008173.1-201ENST00000418901 264 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC8P31273 DYNLL1P7-201ENST00000429273 258 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 ETF1P3-201ENST00000430422 1160 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC8P31273 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC8P31273 ARL5AP2-201ENST00000444698 533 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AC044797.1-201ENST00000445744 679 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 MTATP6P14-201ENST00000455189 673 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 RPL23AP71-201ENST00000470966 469 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 NAMPTP2-201ENST00000505629 1115 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AC133963.2-201ENST00000513686 578 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC8P31273 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC8P31273 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC8P31273 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC8P31273 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC8P31273 MTND1P8-201ENST00000571424 950 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 RN7SL703P-201ENST00000578485 302 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 MIR4512-201ENST00000583257 77 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC8P31273 PCNAP1-202ENST00000595299 752 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 AC006946.3-201ENST00000609791 756 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC8P31273 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC8P31273 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC8P31273 AC010608.3-201ENST00000625048 527 ntBASIC4.71□□□□□ -1.66
HOXC8P31273 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC8P31273 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC8P31273 AC134882.1-201ENST00000603738 1676 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC8P31273 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC8P31273 AC105074.1-201ENST00000623380 3095 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC8P31273 RNU6-796P-201ENST00000391086 107 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC8P31273 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXC8P31273 EIF1P3-201ENST00000423841 334 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 RPL23AP25-201ENST00000430973 463 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 AC011242.1-201ENST00000433596 1158 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 IFNWP4-201ENST00000453148 294 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AL035407.2-201ENST00000454090 378 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC8P31273 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC8P31273 AC108751.2-201ENST00000469993 231 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC010460.2-201ENST00000509054 677 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 SAP18P1-201ENST00000512058 390 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC8P31273 MED28P5-201ENST00000528254 438 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC006064.5-201ENST00000541782 248 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 AC027104.1-201ENST00000563702 681 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC125494.3-201ENST00000602759 455 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC245389.1-201ENST00000605141 529 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC8P31273 RNU4-89P-201ENST00000607443 133 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AL050303.3-201ENST00000613704 284 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HOXC8P31273 ATE1-AS1-202ENST00000636460 506 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AL445984.1-201ENST00000637834 659 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 AC132825.7-201ENST00000638744 335 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 HSPD1P14-201ENST00000432666 1618 ntBASIC4.7□□□□□ -1.66
HOXC8P31273 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC8P31273 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HOXC8P31273 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC8P31273 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC8P31273 AC100871.1-201ENST00000507871 1456 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC000374.1-201ENST00000434698 1745 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC8P31273 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC8P31273 RNA5SP27-201ENST00000363839 119 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 HMGB3P18-201ENST00000406327 590 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 RN7SKP167-201ENST00000411047 285 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC8P31273 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 EIF4A1P1-201ENST00000420241 934 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 RPL36AP10-201ENST00000421785 322 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AL606495.1-201ENST00000422100 813 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC8P31273 RRM2P4-201ENST00000441721 562 ntBASIC4.69□□□□□ -1.66
HOXC8P31273 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms