Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
ABCD3P28288 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ABCD3P28288 RNU5D-1-201ENST00000363299 116 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 RNU4-28P-201ENST00000364739 141 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 SNORD116.1-201ENST00000365628 92 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ABCD3P28288 RNU6-1242P-201ENST00000391052 103 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 ENSAP1-201ENST00000392855 326 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 AL590084.1-201ENST00000407885 387 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 RN7SKP125-201ENST00000410481 302 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AL133384.1-201ENST00000412744 351 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 NRBF2P2-201ENST00000413087 861 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 GTF2IP5-201ENST00000414608 731 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 LUZP4P1-201ENST00000415420 344 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 COX6B1P1-201ENST00000415962 213 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 RPL22P18-201ENST00000417197 377 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 ELOCP9-201ENST00000418624 239 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 AC104333.2-201ENST00000422630 192 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 AC093414.1-201ENST00000434712 514 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 RPL35AP21-201ENST00000437667 333 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 HIGD1AP8-201ENST00000453927 274 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 MTCO3P2-201ENST00000457365 171 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC010301.1-201ENST00000473936 355 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 BTF3P13-201ENST00000513224 490 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC016065.2-201ENST00000514530 444 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 RNU6-1261P-201ENST00000517194 104 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.54□□□□□ -1.68
ABCD3P28288 EEF1A1P37-201ENST00000522748 715 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AP001922.4-201ENST00000526967 290 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 GCSHP4-201ENST00000538792 439 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 EDDM3DP-201ENST00000554692 434 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 CENPUP2-201ENST00000555897 1186 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCD3P28288 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 SULT1C2P1-202ENST00000562418 459 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 OR1F2P-201ENST00000570470 933 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCD3P28288 RN7SL435P-201ENST00000584418 282 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.54□□□□□ -1.68
ABCD3P28288 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 MRPS35P3-201ENST00000603189 709 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC007566.2-201ENST00000603642 413 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC087783.2-201ENST00000605070 562 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AL008729.2-201ENST00000606393 473 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCD3P28288 AC092954.1-201ENST00000609121 445 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC107075.1-201ENST00000613695 314 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC022106.2-201ENST00000620114 757 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 AC006927.4-201ENST00000639187 543 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 AC073869.10-201ENST00000642016 354 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 AL672167.1-204ENST00000641875 3017 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 IRF5P1-201ENST00000504852 2164 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 NEAT1-202ENST00000501122 22743 ntBASIC4.54□□□□□ -1.68
ABCD3P28288 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ABCD3P28288 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ABCD3P28288 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ABCD3P28288 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCD3P28288 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC100778.3-201ENST00000580060 1750 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC107982.1-201ENST00000507171 1300 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC109315.1-201ENST00000584143 1347 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 MIR506-201ENST00000384998 124 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC073264.1-201ENST00000411508 416 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 TBCAP2-201ENST00000416175 326 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms