Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIR323A-201ENST00000362199 86 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RNY3P3-201ENST00000363816 102 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RNU4-1-201ENST00000363925 141 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RN7SKP81-201ENST00000365603 331 ntBASIC6.81□□□□□ -1.32
RFX1P22670 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 RNU6-1226P-201ENST00000384317 107 ntBASIC6.81□□□□□ -1.32
RFX1P22670 MIR433-201ENST00000384837 93 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RPL35AP24-201ENST00000413846 330 ntBASIC6.81□□□□□ -1.32
RFX1P22670 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 MTATP6P18-201ENST00000417994 673 ntBASIC6.81□□□□□ -1.32
RFX1P22670 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 AL354707.3-201ENST00000427308 331 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AL136231.1-201ENST00000429407 730 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RPL7P54-201ENST00000438336 674 ntBASIC6.81□□□□□ -1.32
RFX1P22670 USP9YP15-201ENST00000442391 422 ntBASIC6.81□□□□□ -1.32
RFX1P22670 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.81□□□□□ -1.32
RFX1P22670 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 RNU6-420P-201ENST00000458780 107 ntBASIC6.81□□□□□ -1.32
RFX1P22670 MTCO2P29-201ENST00000465212 189 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AC083798.1-201ENST00000472671 131 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RPL23AP41-201ENST00000484754 458 ntBASIC6.81□□□□□ -1.32
RFX1P22670 RPS4XP14-201ENST00000493072 781 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 FTH1P24-201ENST00000503502 462 ntBASIC6.81□□□□□ -1.32
RFX1P22670 MTCO2P30-201ENST00000503662 364 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 RFPL4AP5-201ENST00000514977 504 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 HIF1AP1-201ENST00000553642 175 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.81□□□□□ -1.32
RFX1P22670 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.81□□□□□ -1.32
RFX1P22670 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.81□□□□□ -1.32
RFX1P22670 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.81□□□□□ -1.32
RFX1P22670 AC026898.1-201ENST00000586404 571 ntBASIC6.81□□□□□ -1.32
RFX1P22670 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 AC007497.1-201ENST00000610421 561 ntBASIC6.81□□□□□ -1.32
RFX1P22670 AC009161.2-201ENST00000624626 138 ntBASIC6.81□□□□□ -1.32
RFX1P22670 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.81□□□□□ -1.32
RFX1P22670 AL161901.1-201ENST00000624954 3425 ntBASIC6.81□□□□□ -1.32
RFX1P22670 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RFX1P22670 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
RFX1P22670 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFX1P22670 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 AOX3P-204ENST00000491025 2107 ntBASIC6.8□□□□□ -1.32
RFX1P22670 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 RNU5E-1-201ENST00000362477 120 ntBASIC6.8□□□□□ -1.32
RFX1P22670 RNU4-2-201ENST00000365668 141 ntBASIC6.8□□□□□ -1.32
RFX1P22670 RNU6-116P-201ENST00000384042 109 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AL356421.1-201ENST00000403255 413 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.8□□□□□ -1.32
RFX1P22670 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.8□□□□□ -1.32
RFX1P22670 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 AC012065.2-201ENST00000421295 375 ntBASIC6.8□□□□□ -1.32
RFX1P22670 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 AC099336.2-201ENST00000422457 254 ntBASIC6.8□□□□□ -1.32
RFX1P22670 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 LYPLA1P1-201ENST00000434514 622 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.8□□□□□ -1.32
RFX1P22670 AL049734.2-201ENST00000441066 616 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AL645936.1-201ENST00000441979 518 ntBASIC6.8□□□□□ -1.32
RFX1P22670 RPS27AP3-201ENST00000453803 454 ntBASIC6.8□□□□□ -1.32
RFX1P22670 HMGB1P15-201ENST00000453854 435 ntBASIC6.8□□□□□ -1.32
RFX1P22670 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 AC099560.2-201ENST00000457554 255 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 SNX18P24-201ENST00000505249 671 ntBASIC6.8□□□□□ -1.32
RFX1P22670 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.8□□□□□ -1.32
RFX1P22670 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.8□□□□□ -1.32
RFX1P22670 AL109766.1-201ENST00000555080 552 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.8□□□□□ -1.32
RFX1P22670 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.8□□□□□ -1.32
RFX1P22670 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.8□□□□□ -1.32
RFX1P22670 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms