Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXD4P09016 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.02□□□□□ -1.77
HOXD4P09016 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD4P09016 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD4P09016 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXD4P09016 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD4P09016 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD4P09016 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXD4P09016 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD4P09016 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD4P09016 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXD4P09016 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXD4P09016 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD4P09016 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 AC027287.1-201ENST00000553115 1453 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 RNU6-252P-201ENST00000363232 107 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 RNU6-666P-201ENST00000363499 107 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 RNU6-796P-201ENST00000391086 107 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 TATDN1P1-201ENST00000414123 891 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 BX664727.1-201ENST00000416024 466 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 TMSB10P2-201ENST00000416049 131 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 CYP4F29P-201ENST00000420685 446 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 ELOCP10-201ENST00000440624 327 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 RPL23AP43-201ENST00000446445 471 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AL606517.1-201ENST00000446914 387 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 RPL7P19-201ENST00000469948 618 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 METTL15P1-201ENST00000481421 1045 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 CDH12P2-201ENST00000504393 298 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 PGBD4P4-201ENST00000509673 613 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 MRPL49P2-201ENST00000521066 465 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 OR8G5-201ENST00000524943 1041 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD4P09016 ELOCP34-201ENST00000604436 327 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 AC007275.1-201ENST00000621243 671 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD4P09016 AL161637.1-201ENST00000622380 412 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD4P09016 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD4P09016 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXD4P09016 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
HOXD4P09016 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXD4P09016 AL133412.1-201ENST00000380194 2992 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AC009229.4-201ENST00000623854 1947 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
HOXD4P09016 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD4P09016 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HOXD4P09016 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXD4P09016 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD4P09016 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HOXD4P09016 ZNF90P1-201ENST00000480493 1951 ntBASIC4□□□□□ -1.77
HOXD4P09016 AL355852.1-201ENST00000454081 1771 ntBASIC4□□□□□ -1.77
HOXD4P09016 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4□□□□□ -1.77
HOXD4P09016 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD4P09016 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HOXD4P09016 AL121657.1-201ENST00000327215 531 ntBASIC4□□□□□ -1.77
HOXD4P09016 RNU6-304P-201ENST00000364855 107 ntBASIC4□□□□□ -1.77
HOXD4P09016 RNA5SP366-201ENST00000365454 123 ntBASIC4□□□□□ -1.77
HOXD4P09016 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXD4P09016 RPL22P22-201ENST00000395439 379 ntBASIC4□□□□□ -1.77
HOXD4P09016 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXD4P09016 AL445189.1-201ENST00000405722 338 ntBASIC4□□□□□ -1.77
HOXD4P09016 RPL6P29-201ENST00000414863 865 ntBASIC4□□□□□ -1.77
HOXD4P09016 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4□□□□□ -1.77
HOXD4P09016 TRGV6-201ENST00000417928 299 ntBASIC4□□□□□ -1.77
HOXD4P09016 AC013262.1-201ENST00000426710 252 ntBASIC4□□□□□ -1.77
HOXD4P09016 RPS26P47-201ENST00000427219 348 ntBASIC4□□□□□ -1.77
HOXD4P09016 AL160175.1-201ENST00000428124 247 ntBASIC4□□□□□ -1.77
HOXD4P09016 RPL7P4-203ENST00000430239 730 ntBASIC4□□□□□ -1.77
HOXD4P09016 RPL23AP25-201ENST00000430973 463 ntBASIC4□□□□□ -1.77
HOXD4P09016 NDUFA5P10-201ENST00000432147 357 ntBASIC4□□□□□ -1.77
HOXD4P09016 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4□□□□□ -1.77
HOXD4P09016 PPIAP17-201ENST00000438507 471 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms