Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC006480.1-201ENST00000449887 378 ntBASIC3.15□□□□□ -1.91
CTSDP07339 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 AC026979.1-201ENST00000492525 396 ntBASIC3.15□□□□□ -1.91
CTSDP07339 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.15□□□□□ -1.91
CTSDP07339 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 OR5AP1P-201ENST00000529730 940 ntBASIC3.15□□□□□ -1.91
CTSDP07339 AL139174.1-201ENST00000531489 886 ntBASIC3.15□□□□□ -1.91
CTSDP07339 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.15□□□□□ -1.91
CTSDP07339 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 NPM1P47-201ENST00000560843 856 ntBASIC3.15□□□□□ -1.91
CTSDP07339 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.15□□□□□ -1.91
CTSDP07339 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.15□□□□□ -1.91
CTSDP07339 AL713998.2-201ENST00000604538 1198 ntBASIC3.15□□□□□ -1.91
CTSDP07339 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
CTSDP07339 MIR378J-201ENST00000611988 109 ntBASIC3.15□□□□□ -1.91
CTSDP07339 MIR8059-201ENST00000620427 81 ntBASIC3.15□□□□□ -1.91
CTSDP07339 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CTSDP07339 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CTSDP07339 AP000756.2-201ENST00000624168 2567 ntBASIC3.15□□□□□ -1.91
CTSDP07339 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTSDP07339 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTSDP07339 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CTSDP07339 AC126755.2-208ENST00000327792 462 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC138969.1-213ENST00000331436 462 ntBASIC3.14□□□□□ -1.91
CTSDP07339 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 OR13C3-201ENST00000374781 1108 ntBASIC3.14□□□□□ -1.91
CTSDP07339 RPS26P8-201ENST00000393490 348 ntBASIC3.14□□□□□ -1.91
CTSDP07339 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTSDP07339 RN7SKP33-201ENST00000410942 340 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.14□□□□□ -1.91
CTSDP07339 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.14□□□□□ -1.91
CTSDP07339 AC245517.2-201ENST00000442890 346 ntBASIC3.14□□□□□ -1.91
CTSDP07339 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AL035551.1-201ENST00000446931 348 ntBASIC3.14□□□□□ -1.91
CTSDP07339 OR52Y1P-201ENST00000452418 828 ntBASIC3.14□□□□□ -1.91
CTSDP07339 CEACAMP4-201ENST00000457676 421 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.14□□□□□ -1.91
CTSDP07339 RPS23P7-201ENST00000466210 444 ntBASIC3.14□□□□□ -1.91
CTSDP07339 RN7SL330P-201ENST00000469709 307 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC010618.1-201ENST00000469924 477 ntBASIC3.14□□□□□ -1.91
CTSDP07339 RPS3AP50-201ENST00000487064 803 ntBASIC3.14□□□□□ -1.91
CTSDP07339 CEACAMP10-202ENST00000495431 496 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC111000.5-201ENST00000506559 1178 ntBASIC3.14□□□□□ -1.91
CTSDP07339 PCBP2P3-201ENST00000509726 843 ntBASIC3.14□□□□□ -1.91
CTSDP07339 RAC1P2-201ENST00000511164 579 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTSDP07339 RNA5SP208-201ENST00000516156 78 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.14□□□□□ -1.91
CTSDP07339 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 AC084757.1-201ENST00000559987 490 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.14□□□□□ -1.91
CTSDP07339 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
CTSDP07339 AC115621.1-201ENST00000604653 858 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC005962.2-201ENST00000611427 652 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC008121.2-201ENST00000614647 523 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC006338.2-201ENST00000616864 791 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AC016957.2-201ENST00000616998 848 ntBASIC3.14□□□□□ -1.91
CTSDP07339 AL445567.2-201ENST00000618935 498 ntBASIC3.14□□□□□ -1.91
CTSDP07339 MIR6830-201ENST00000636015 70 ntBASIC3.14□□□□□ -1.91
CTSDP07339 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTSDP07339 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTSDP07339 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTSDP07339 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
CTSDP07339 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.14□□□□□ -1.91
CTSDP07339 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTSDP07339 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTSDP07339 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CTSDP07339 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.14□□□□□ -1.91
CTSDP07339 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSDP07339 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CTSDP07339 AL021368.2-201ENST00000606125 5352 ntBASIC3.13□□□□□ -1.91
CTSDP07339 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CTSDP07339 SNORA62-201ENST00000365493 153 ntBASIC3.13□□□□□ -1.91
CTSDP07339 ENSAP1-201ENST00000392855 326 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AMZ2P2-201ENST00000406819 1057 ntBASIC3.13□□□□□ -1.91
CTSDP07339 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSDP07339 AL691447.1-201ENST00000419456 387 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSDP07339 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 COX6CP17-201ENST00000421389 185 ntBASIC3.13□□□□□ -1.91
CTSDP07339 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 ARF4P2-201ENST00000430209 526 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms