Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC007685.1-201ENST00000329806 452 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A2P05997 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.84□□□□□ -1.63
COL5A2P05997 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL5A2P05997 SNORD17-201ENST00000390930 237 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 SNORA48.5-201ENST00000391143 135 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AJ239321.1-201ENST00000424255 564 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 DYNLL1P7-201ENST00000429273 258 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 HLA-N-201ENST00000437516 135 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A2P05997 OR7L1P-201ENST00000456181 380 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AC025518.1-201ENST00000479856 347 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 MTND3P3-201ENST00000505004 126 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.84□□□□□ -1.63
COL5A2P05997 AC017037.1-201ENST00000508460 471 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AC090136.1-201ENST00000520009 240 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AC019227.1-201ENST00000526902 510 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 CYP4A43P-201ENST00000568156 121 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AC122134.1-202ENST00000569111 1201 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 MIR4325-201ENST00000583049 90 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 MIR3936-201ENST00000584304 110 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 AC006116.10-201ENST00000591836 581 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 OR7A8P-201ENST00000595427 913 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A2P05997 NF1P10-201ENST00000613227 742 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 MIR7154-201ENST00000620673 73 ntBASIC4.84□□□□□ -1.63
COL5A2P05997 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A2P05997 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A2P05997 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A2P05997 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A2P05997 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A2P05997 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL5A2P05997 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
COL5A2P05997 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A2P05997 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.83□□□□□ -1.64
COL5A2P05997 AC013410.2-201ENST00000422627 201 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 OSTCP5-201ENST00000425293 453 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 RSL24D1P8-201ENST00000434442 492 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL5A2P05997 RNA5SP103-201ENST00000459503 118 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 MORF4L2P1-201ENST00000503761 858 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.83□□□□□ -1.64
COL5A2P05997 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.83□□□□□ -1.64
COL5A2P05997 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.83□□□□□ -1.64
COL5A2P05997 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
COL5A2P05997 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A2P05997 AC007423.1-201ENST00000605009 627 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A2P05997 AP003072.5-201ENST00000623872 773 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 AL138960.2-201ENST00000625145 535 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A2P05997 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL5A2P05997 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 AC007529.1-201ENST00000418574 2178 ntBASIC4.83□□□□□ -1.64
COL5A2P05997 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A2P05997 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.82□□□□□ -1.64
COL5A2P05997 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL5A2P05997 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL5A2P05997 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL5A2P05997 KCTD9P3-201ENST00000434597 1169 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.82□□□□□ -1.64
COL5A2P05997 VN1R96P-201ENST00000446052 858 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.82□□□□□ -1.64
COL5A2P05997 TPT1P1-201ENST00000458495 518 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AC093663.1-201ENST00000497190 394 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AP000926.3-201ENST00000497201 299 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.82□□□□□ -1.64
COL5A2P05997 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL5A2P05997 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.82□□□□□ -1.64
COL5A2P05997 AC006363.1-201ENST00000603806 463 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AC107905.1-201ENST00000616204 426 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AC069209.1-201ENST00000619282 651 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
COL5A2P05997 UBE3AP2-201ENST00000429033 2259 ntBASIC4.82□□□□□ -1.64
COL5A2P05997 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.82□□□□□ -1.64
COL5A2P05997 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.82□□□□□ -1.64
COL5A2P05997 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
COL5A2P05997 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL5A2P05997 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
COL5A2P05997 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL5A2P05997 OR5T3-201ENST00000303059 1023 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 HDGFP1-201ENST00000405943 252 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.81□□□□□ -1.64
COL5A2P05997 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.81□□□□□ -1.64
COL5A2P05997 AL035458.1-201ENST00000433096 585 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AC006480.1-201ENST00000449887 378 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.81□□□□□ -1.64
COL5A2P05997 MTND3P4-201ENST00000453537 303 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 RPL37P3-201ENST00000456825 293 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 COL6A4P2-205ENST00000509855 506 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms