Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC124945.1-201ENST00000485133 188 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.25□□□□□ -1.57
CNOT4O95628 MTCO2P30-201ENST00000503662 364 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC008629.2-201ENST00000503783 483 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC008638.1-201ENST00000506035 866 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.25□□□□□ -1.57
CNOT4O95628 RNY4P37-201ENST00000516225 96 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 RNU6-875P-201ENST00000516488 106 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.25□□□□□ -1.57
CNOT4O95628 AC239860.2-201ENST00000525886 270 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AP002748.2-201ENST00000528671 348 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC091078.2-201ENST00000557145 559 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.25□□□□□ -1.57
CNOT4O95628 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.25□□□□□ -1.57
CNOT4O95628 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.25□□□□□ -1.57
CNOT4O95628 SNORD95-201ENST00000579879 68 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.25□□□□□ -1.57
CNOT4O95628 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 TCP11X1-202ENST00000622971 1372 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNOT4O95628 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNOT4O95628 AC092326.2-201ENST00000624772 1561 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CNOT4O95628 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 AL031119.1-201ENST00000404707 1879 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
CNOT4O95628 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 Y_RNA.38-201ENST00000362617 102 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 RNU6-433P-201ENST00000363216 104 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 RNU6-619P-201ENST00000365146 108 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 RN7SKP292-201ENST00000365522 317 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.24□□□□□ -1.57
CNOT4O95628 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 RNU6-1009P-201ENST00000390996 107 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 U3.25-201ENST00000391209 220 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AL121835.1-201ENST00000404250 354 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 SNRPEP6-201ENST00000407465 277 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AL121878.1-201ENST00000418638 859 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC007559.1-201ENST00000428736 355 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 SKP1P3-201ENST00000429280 487 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 OR7E125P-201ENST00000443450 846 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AP000281.1-201ENST00000444036 316 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AP006222.1-205ENST00000450734 457 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 SDC4P-201ENST00000453285 601 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 YWHAEP1-201ENST00000453697 763 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AL033528.1-201ENST00000453780 140 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 DNAJB5P1-201ENST00000454004 806 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.24□□□□□ -1.57
CNOT4O95628 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC006539.1-201ENST00000481419 501 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 LARP1BP2-201ENST00000486594 519 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 HMGN2P25-201ENST00000486956 268 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 AC091951.2-201ENST00000500762 203 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC011352.3-201ENST00000505162 593 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC025465.4-201ENST00000513422 638 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.24□□□□□ -1.57
CNOT4O95628 PAICSP4-201ENST00000517543 1253 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.24□□□□□ -1.57
CNOT4O95628 PCNAP4-201ENST00000532690 730 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.24□□□□□ -1.57
CNOT4O95628 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.24□□□□□ -1.57
CNOT4O95628 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.24□□□□□ -1.57
CNOT4O95628 RN7SL787P-201ENST00000613000 284 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC005332.6-201ENST00000613178 446 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AL139089.1-201ENST00000620372 975 ntBASIC5.24□□□□□ -1.57
CNOT4O95628 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.24□□□□□ -1.57
CNOT4O95628 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
CNOT4O95628 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CNOT4O95628 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNOT4O95628 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNOT4O95628 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNOT4O95628 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.23□□□□□ -1.57
CNOT4O95628 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.23□□□□□ -1.57
CNOT4O95628 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNOT4O95628 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNOT4O95628 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNOT4O95628 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms