Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RAPGEF3O95398 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RAPGEF3O95398 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RAPGEF3O95398 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RAPGEF3O95398 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RAPGEF3O95398 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AP005432.1-201ENST00000580891 3485 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 RNU6-666P-201ENST00000363499 107 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 Y_RNA.472-201ENST00000384322 102 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 ENSAP1-201ENST00000392855 326 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC105402.1-201ENST00000413336 545 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 VTA1P1-201ENST00000414044 866 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 FTLP19-201ENST00000433300 394 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC005410.1-202ENST00000460347 485 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC069528.1-202ENST00000482888 637 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC034244.1-201ENST00000507687 207 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC110768.1-201ENST00000509222 400 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 SNORA3.4-201ENST00000515969 96 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC135279.1-201ENST00000543493 504 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 MTCYBP27-201ENST00000555160 670 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.6□□□□□ -1.35
RAPGEF3O95398 AL020997.3-201ENST00000602843 359 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC007349.4-201ENST00000608114 532 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AC015804.1-201ENST00000622935 435 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 AL445487.1-201ENST00000415694 1580 ntBASIC6.6□□□□□ -1.35
RAPGEF3O95398 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 DDX18P5-201ENST00000534547 1306 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 RNU6-452P-201ENST00000384406 107 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 RNU6-185P-201ENST00000384421 107 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AL356320.2-201ENST00000417263 507 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 OR6K4P-201ENST00000423179 955 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 NPM1P18-201ENST00000434232 732 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC002542.1-201ENST00000440683 193 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AL353093.1-201ENST00000441292 436 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 ZNF321P-202ENST00000550843 495 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC090695.1-201ENST00000561269 1222 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC010487.1-201ENST00000594408 1172 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 BPIFA4P-203ENST00000603168 689 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AL606490.9-201ENST00000603331 271 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 AC069304.3-201ENST00000603938 1084 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AL451064.1-201ENST00000607718 471 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 FAM27D1-201ENST00000612308 341 ntBASIC6.59□□□□□ -1.35
RAPGEF3O95398 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.59□□□□□ -1.35
RAPGEF3O95398 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RAPGEF3O95398 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RAPGEF3O95398 ZNF876P-202ENST00000398732 1485 ntBASIC6.59□□□□□ -1.36
RAPGEF3O95398 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RAPGEF3O95398 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.59□□□□□ -1.36
RAPGEF3O95398 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.58□□□□□ -1.36
RAPGEF3O95398 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RAPGEF3O95398 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RAPGEF3O95398 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RAPGEF3O95398 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RAPGEF3O95398 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RAPGEF3O95398 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RAPGEF3O95398 RLIMP2-201ENST00000427891 1563 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RAPGEF3O95398 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RAPGEF3O95398 MIR137-201ENST00000385223 102 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 RNU6-244P-201ENST00000391028 104 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 RNU6-1242P-201ENST00000391052 103 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 RNU11-4P-201ENST00000391149 133 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.58□□□□□ -1.36
RAPGEF3O95398 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.58□□□□□ -1.36
RAPGEF3O95398 TXNL1P1-201ENST00000429528 554 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 MTCO1P52-201ENST00000433928 531 ntBASIC6.58□□□□□ -1.36
RAPGEF3O95398 AC004938.1-201ENST00000438468 308 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms