Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC120057.2-201ENST00000571520 271 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RN7SL703P-201ENST00000578485 302 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 SLC25A36P1-201ENST00000590111 465 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AL606490.9-201ENST00000603331 271 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC011472.4-201ENST00000615848 491 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 MIR6500-201ENST00000622700 86 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC080188.3-201ENST00000624842 748 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 AC017104.4-201ENST00000636283 1592 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 ASNSP1-204ENST00000641977 1664 ntBASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD8-MDP1E9PL57 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NEDD8-MDP1E9PL57 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.21□□□□□ -1.73
NEDD8-MDP1E9PL57 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
NEDD8-MDP1E9PL57 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
NEDD8-MDP1E9PL57 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU1-15P-201ENST00000353977 144 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU6-984P-201ENST00000363236 109 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU2-17P-201ENST00000410290 190 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL158825.1-201ENST00000414735 521 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL158050.1-201ENST00000416077 457 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RPS23P10-201ENST00000416185 486 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 PRELID3BP10-201ENST00000431957 584 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC133473.1-201ENST00000455173 299 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RN7SL809P-201ENST00000482040 297 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL29P14-201ENST00000495837 428 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC108471.1-201ENST00000513977 287 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC023632.4-201ENST00000517783 191 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 MYL12AP1-201ENST00000518490 515 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC113192.3-201ENST00000529152 742 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 UBTFL9-201ENST00000534504 1148 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL109741.3-201ENST00000561748 592 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 MIR5684-201ENST00000585074 65 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC026979.4-201ENST00000606555 645 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC007342.8-201ENST00000623278 678 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 CDRT1-208ENST00000630868 794 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AC055839.1-201ENST00000634467 498 ntBASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
NEDD8-MDP1E9PL57 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC068254.2-201ENST00000623938 3577 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU6-178P-201ENST00000384631 104 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 MIR554-201ENST00000384874 96 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU6-796P-201ENST00000391086 107 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RN7SKP202-201ENST00000410439 330 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms