Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC011816.2-201ENST00000607089 556 ntBASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AC123768.4-201ENST00000616244 701 ntBASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AC073869.10-201ENST00000642016 354 ntBASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AC005034.3-201ENST00000604845 1747 ntBASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.78□□□□□ -1.32
TMEM88BA6NKF7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
TMEM88BA6NKF7 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 MIR192-201ENST00000384915 110 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 ARF4P3-201ENST00000397387 509 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 MTND4LP20-201ENST00000402379 270 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 RPS20P2-201ENST00000402520 389 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 MTCO1P20-201ENST00000425366 358 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AL445669.1-201ENST00000426743 755 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 RBMY2QP-201ENST00000429799 1147 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC023141.8-201ENST00000442554 208 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 RPL5P22-201ENST00000480199 884 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 RN7SL447P-201ENST00000494711 245 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 ARL4AP2-201ENST00000507378 601 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC063949.1-201ENST00000552900 865 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AL512360.1-201ENST00000555346 234 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC053481.3-201ENST00000577881 843 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 MIR3189-201ENST00000578735 73 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AL365503.1-201ENST00000605247 905 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC000068.2-201ENST00000608816 460 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 AC009237.17-201ENST00000618111 748 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 CYP3A51P-201ENST00000633513 256 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 MTND4P12-201ENST00000498999 1377 ntBASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.77□□□□□ -1.33
TMEM88BA6NKF7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AC011493.1-201ENST00000596753 1632 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AP005432.1-201ENST00000580891 3485 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 Y_RNA.70-201ENST00000362886 110 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 Y_RNA.295-201ENST00000364918 102 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 SNORA62-201ENST00000365493 153 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 RNU6-744P-201ENST00000365557 107 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 RNU6-1316P-201ENST00000384242 108 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AC016769.3-201ENST00000396562 315 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AL136380.1-201ENST00000447970 162 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 GAPDHP14-201ENST00000450472 937 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 APOOP2-201ENST00000461561 539 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 OR52A4P-201ENST00000472867 958 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AC041039.1-201ENST00000485656 536 ntBASIC6.76□□□□□ -1.33
TMEM88BA6NKF7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms