Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC011742.1-201ENST00000431448 434 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 BMS1P19-201ENST00000433925 393 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ARL4AP4-201ENST00000434170 518 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ELOCP18-201ENST00000434209 337 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC099063.2-201ENST00000446360 662 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC243772.1-201ENST00000451620 410 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 UBDP1-202ENST00000457888 382 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 SLC25A15P5-201ENST00000508033 253 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 RNA5SP164-201ENST00000516533 110 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 PAICSP4-201ENST00000517543 1253 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 IGHV3-63-201ENST00000518422 341 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC007991.1-201ENST00000522680 631 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC107918.3-201ENST00000533272 382 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 OR8X1P-201ENST00000534542 869 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC087888.1-201ENST00000550884 1254 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 GLRXP2-201ENST00000555594 321 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 HNRNPCP4-201ENST00000571636 900 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC034236.3-201ENST00000605999 461 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC097504.1-201ENST00000515103 2415 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AC024560.2-201ENST00000507981 1497 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 SNORA73.2-201ENST00000364946 201 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 GSTA12P-201ENST00000402398 508 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 RN7SKP247-201ENST00000411094 308 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC092647.1-201ENST00000420654 287 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL590609.2-201ENST00000421430 368 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 CR848007.2-201ENST00000424918 787 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC022022.1-201ENST00000430304 178 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 TPTE2P3-201ENST00000441562 1189 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC091564.1-201ENST00000464563 479 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC108941.1-201ENST00000502853 530 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC021087.2-201ENST00000504656 1203 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 HMGB1P47-201ENST00000511281 589 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC026726.1-201ENST00000512859 601 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL731537.2-201ENST00000561565 951 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 MIR5187-201ENST00000583479 76 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL133247.2-201ENST00000603236 482 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL049634.3-201ENST00000604968 457 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC245389.2-201ENST00000616023 576 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AC242843.1-201ENST00000618702 573 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF285B-201ENST00000561698 1767 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
SMIM28A0A1B0GU29 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 RNU6-31P-201ENST00000384388 108 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 MIR200C-201ENST00000384980 68 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL512430.2-201ENST00000406786 339 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL390879.2-203ENST00000426943 1121 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL353898.1-201ENST00000444055 238 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL627224.1-201ENST00000448334 444 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms