Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RPS10P14-201ENST00000440748 502 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC073648.4-201ENST00000442655 781 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC009963.2-201ENST00000453431 138 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 OR7L1P-201ENST00000456181 380 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC068228.1-201ENST00000461723 211 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 MED27-204ENST00000474263 762 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 HMGN2P13-201ENST00000476476 274 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC068724.1-201ENST00000487100 792 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LSM3P4-201ENST00000502948 309 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC010409.2-201ENST00000505780 478 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 KLHL2P1-201ENST00000508691 521 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC093824.1-201ENST00000508796 343 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 KRT19P6-201ENST00000510983 209 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 APOOP4-201ENST00000513530 597 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RNA5SP217-201ENST00000515959 91 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RNU2-27P-201ENST00000516185 142 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AP006245.1-201ENST00000522549 120 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 NACA-211ENST00000548563 827 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC025627.2-201ENST00000576220 160 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 RN7SL690P-201ENST00000582087 240 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL049539.1-201ENST00000611964 459 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL357559.1-201ENST00000622228 274 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL445363.3-201ENST00000623080 671 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AC129778.1-202ENST00000623812 261 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AL591379.1-207ENST00000635982 261 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AMYH02020865.1-205ENST00000636189 261 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 ZNF33CP-201ENST00000432492 2030 ntBASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01558Q9Y6Z2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AL137100.1-201ENST00000556703 1620 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC107081.3-201ENST00000612715 2034 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 COX6B1P3-201ENST00000312310 260 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 MT-TP-201ENST00000387461 68 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 HMGB3P19-201ENST00000403971 560 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 ZNF37CP-201ENST00000406795 241 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC093155.2-201ENST00000420734 937 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 RPL23AP82-202ENST00000427528 469 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 SAR1AP4-201ENST00000429225 591 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 RPL21P112-201ENST00000434403 463 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC006994.1-201ENST00000438212 839 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 YWHAZP2-201ENST00000440317 728 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AL390119.1-201ENST00000440329 312 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AL357552.1-201ENST00000445254 415 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 NUTF2P3-201ENST00000448540 384 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AL162591.2-201ENST00000449634 317 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC006480.1-201ENST00000449887 378 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 CENPBD1P1-201ENST00000464061 469 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC053481.1-201ENST00000467217 306 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 NCOR1P1-202ENST00000486162 291 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 RPL23AP55-201ENST00000498163 452 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 OR5H3P-201ENST00000502817 919 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC073648.3-201ENST00000504939 925 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 IGLVI-70-201ENST00000523272 390 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC079905.1-201ENST00000549280 475 ntBASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01558Q9Y6Z2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms