Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 RPS20P14-201ENST00000412545 360 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC009237.10-201ENST00000414112 510 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 MTATP6P20-201ENST00000414147 562 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 NANOGP5-201ENST00000424456 877 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 CBX1P1-201ENST00000440184 427 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 PHBP16-201ENST00000446318 950 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 MTND1P31-201ENST00000449206 961 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC008280.2-201ENST00000455473 307 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 SNORD11.1-201ENST00000459482 85 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 RN7SL810P-201ENST00000493031 276 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC113420.1-201ENST00000507903 571 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 NPM1P6-201ENST00000521088 871 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 OR8K4P-201ENST00000534608 872 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 PDCD5P1-201ENST00000543528 309 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC093424.1-201ENST00000604999 338 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC011374.2-201ENST00000607135 526 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC097505.1-201ENST00000610199 565 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC079395.3-201ENST00000615161 484 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC022079.2-201ENST00000619739 566 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC104985.3-201ENST00000623479 597 ntBASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX9Q9Y5X1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RNU6-532P-201ENST00000384318 107 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 SNORD96B-201ENST00000386148 79 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AF228730.1-201ENST00000397972 663 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 LAP3P1-201ENST00000403648 294 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RNU4-25P-201ENST00000410569 230 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL160275.2-201ENST00000412010 394 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 P2RY10P2-201ENST00000416730 913 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL139095.3-201ENST00000419672 1203 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 OSTCP5-201ENST00000425293 453 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 C4BPAP2-201ENST00000428434 478 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RPS29P17-201ENST00000430795 166 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL035458.1-201ENST00000433096 585 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RN7SL98P-201ENST00000462271 300 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC002456.2-201ENST00000509356 380 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC093752.1-206ENST00000511823 336 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC112673.1-201ENST00000513168 575 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC092593.2-201ENST00000513866 913 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RN7SKP141-201ENST00000516167 338 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 RNU6-347P-201ENST00000516658 105 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AP002360.3-201ENST00000607673 710 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AL121890.3-201ENST00000618494 516 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AP003497.2-201ENST00000624220 967 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC011944.2-201ENST00000624440 683 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 ZNF849P-201ENST00000594711 1566 ntBASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX9Q9Y5X1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms