Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC126915.2-201ENST00000610957 190 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC243773.3-201ENST00000613270 256 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AL133243.1-201ENST00000614487 366 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC068722.2-201ENST00000618734 544 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHGA3Q9Y5H0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC011978.2-201ENST00000569835 2054 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL21P132-201ENST00000331267 462 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 SNRPEP3-201ENST00000338402 276 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RNU6-462P-201ENST00000362659 105 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 Y_RNA.302-201ENST00000364997 102 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RNA5SP88-201ENST00000365560 109 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RNU1-149P-201ENST00000390870 161 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL23AP29-201ENST00000397284 453 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AL450338.1-201ENST00000407987 512 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AL139128.1-201ENST00000413921 941 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF885P-201ENST00000420174 1098 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC108075.1-201ENST00000424692 529 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 MTND1P20-201ENST00000430341 950 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 THAP5P1-201ENST00000439089 262 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 CEACAMP9-201ENST00000442990 513 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AL137845.2-201ENST00000444292 988 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 SETP11-201ENST00000473027 690 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RPSAP50-201ENST00000481955 852 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 LTV1P1-201ENST00000510683 1237 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RNY4P37-201ENST00000516225 96 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC008802.1-201ENST00000519121 791 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 NDUFA5P2-201ENST00000519723 344 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 DEFB131D-201ENST00000526803 184 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF705CP-201ENST00000530515 889 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AL389895.1-201ENST00000554127 252 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SL708P-201ENST00000580952 299 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 MTCYBP22-201ENST00000603788 447 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC005191.1-201ENST00000603950 358 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC064872.1-201ENST00000604823 1072 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AC073136.1-201ENST00000449426 2884 ntBASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHGA3Q9Y5H0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms