Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AL359195.2-201ENST00000623657 4412 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AL139276.1-201ENST00000311910 1001 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RNU5E-8P-201ENST00000363502 116 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 Y_RNA.148-201ENST00000363557 117 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RNU1-65P-201ENST00000363919 148 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RNA5SP232-201ENST00000364144 119 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-39P-201ENST00000384344 107 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-903P-201ENST00000391270 109 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SKP235-201ENST00000410662 305 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RPL37P10-201ENST00000412884 288 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC114482.1-201ENST00000418010 247 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC239367.3-201ENST00000428996 814 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AL590128.1-201ENST00000433407 286 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AL645939.3-201ENST00000435408 225 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC128677.1-201ENST00000436016 442 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 PRPS1P1-201ENST00000445305 876 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 HMGB1P15-201ENST00000453854 435 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 TRBV26-201ENST00000456572 344 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC022415.1-202ENST00000486612 523 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 MYL12AP1-201ENST00000518490 515 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC009902.1-201ENST00000519351 183 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 SNRPCP6-201ENST00000528310 210 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 MIR4680-201ENST00000580906 66 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 UBE2L4-201ENST00000587688 464 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AL512782.1-201ENST00000603093 364 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AL121992.2-201ENST00000606262 256 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC092807.2-201ENST00000609367 243 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 MIR6861-201ENST00000618657 64 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 U4.1-201ENST00000620349 87 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC022418.1-201ENST00000624118 445 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC073592.6-201ENST00000624271 415 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AP001052.1-201ENST00000626421 99 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC078880.4-201ENST00000617627 1749 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AP000866.6-201ENST00000638898 3579 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 MTND5P10-201ENST00000603719 1809 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 AC110597.1-201ENST00000562669 3176 ntBASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
PCDHB11Q9Y5F2 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 PABPC1P8-201ENST00000452851 2086 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC016583.1-201ENST00000624221 2431 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms