Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 PHBP17-201ENST00000528576 541 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC092451.2-201ENST00000538746 658 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 CR383656.14-201ENST00000551951 406 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 MIR4697-201ENST00000582977 78 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC011477.5-201ENST00000586571 259 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC012254.4-201ENST00000588843 273 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 RMST_10.1-201ENST00000616309 154 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC024595.1-201ENST00000623088 387 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC140479.6-201ENST00000633535 357 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC046144.1-201ENST00000478559 1853 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC017104.4-201ENST00000636283 1592 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 MTCO1P4-201ENST00000520516 1409 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 SNORD56.4-201ENST00000363883 71 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 OR52E6-202ENST00000379946 954 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 NRBF2P2-201ENST00000413087 861 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 IPMKP1-201ENST00000425988 855 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 RPS7P5-201ENST00000441482 581 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC068135.1-201ENST00000446164 246 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC079804.1-201ENST00000461922 436 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC010469.1-201ENST00000463864 576 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 RN7SL385P-201ENST00000468873 276 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 RPL21P47-201ENST00000483696 477 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC010306.1-201ENST00000523223 1117 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC083923.1-201ENST00000523708 376 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 TRAV8-5-201ENST00000537369 341 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AL109766.1-201ENST00000555080 552 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC090079.2-201ENST00000575289 768 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC124283.4-201ENST00000581815 456 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC026741.1-201ENST00000605892 482 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC010857.1-201ENST00000606398 594 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC080188.3-201ENST00000624842 748 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC068254.2-201ENST00000623938 3577 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 AC010300.1-201ENST00000600671 5134 ntBASIC4.07□□□□□ -1.76
ATG4BQ9Y4P1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms