Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AL592437.2-201ENST00000421655 2434 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRAPPC4Q9Y296 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TRAPPC4Q9Y296 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.81
TRAPPC4Q9Y296 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC017002.4-201ENST00000604721 1525 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC116667.1-201ENST00000604855 2072 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RPL26P37-201ENST00000411983 438 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RWDD4P2-201ENST00000426392 563 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC096638.2-201ENST00000434965 711 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC006011.1-201ENST00000442758 349 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AL353898.1-201ENST00000444055 238 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AL157827.1-201ENST00000447622 132 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 FABP3P2-201ENST00000453169 399 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RPL38P1-201ENST00000460914 211 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC010307.1-201ENST00000467206 836 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RWDD4P1-201ENST00000488019 565 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RN7SL604P-201ENST00000492589 296 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 HAUS1P1-201ENST00000505275 832 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC093824.1-201ENST00000508796 343 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 IGKV2D-23-201ENST00000518179 286 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 IGKV2D-10-201ENST00000520194 281 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 NPM1P35-201ENST00000533043 868 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC068714.1-201ENST00000559623 800 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC084757.1-201ENST00000559987 490 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AL731537.2-201ENST00000561565 951 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 KPNA2P3-201ENST00000584190 848 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC011477.5-201ENST00000586571 259 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 MIR6830-201ENST00000636015 70 ntBASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRAPPC4Q9Y296 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC008725.1-201ENST00000605123 2263 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 RNU6-40P-201ENST00000384254 107 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 RNU6-31P-201ENST00000384388 108 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 ENSAP1-201ENST00000392855 326 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 RN7SKP33-201ENST00000410942 340 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 DPY19L1P2-201ENST00000426647 915 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 MTND4LP14-201ENST00000429447 288 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 MRPL50P1-201ENST00000431951 384 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 MTCO3P20-201ENST00000454926 688 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 METTL15P1-201ENST00000481421 1045 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 PRELID3BP7-201ENST00000503606 469 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 RN7SKP122-201ENST00000515923 296 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 RNU6-1231P-201ENST00000517185 103 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 CYCSP29-201ENST00000533731 318 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 SNRPGP1-201ENST00000553864 222 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC012417.1-201ENST00000582307 1039 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms