Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 MIR670-201ENST00000390142 98 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 TPT1P2-201ENST00000413105 503 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 RPS4XP4-201ENST00000443195 763 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC005229.2-201ENST00000456995 399 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 RN7SL132P-201ENST00000478131 296 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 MIR4512-201ENST00000583257 77 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC025946.2-201ENST00000603398 234 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC010680.3-201ENST00000604215 520 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 OR6R2P-201ENST00000609216 300 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AL391834.1-201ENST00000609609 560 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC016957.2-201ENST00000616998 848 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 MIR6075-201ENST00000620782 95 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AC112484.5-201ENST00000624189 228 ntBASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTNNA3Q9UI47 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 RNA5SP44-201ENST00000410446 133 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC104629.2-201ENST00000468627 598 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 S100A11P1-201ENST00000477525 312 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC146944.2-203ENST00000502493 354 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC025554.1-201ENST00000505641 188 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC139495.1-202ENST00000513164 354 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC053481.3-201ENST00000577881 843 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 MIR4286-201ENST00000580651 93 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 MIR4444-1-201ENST00000581696 74 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 MIR4444-2-201ENST00000584390 74 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 uc_338.9-201ENST00000617424 182 ntBASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTNNA3Q9UI47 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CTNNA3Q9UI47 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTNNA3Q9UI47 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CTNNA3Q9UI47 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.84□□□□□ -1.64
CTNNA3Q9UI47 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC017002.4-201ENST00000604721 1525 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 RNU6-532P-201ENST00000384318 107 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 MIR320B1-201ENST00000390209 79 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 RPL31P52-201ENST00000407532 367 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AL603766.1-201ENST00000407763 664 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 OR5BE1P-201ENST00000425977 939 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 MTCO1P54-201ENST00000430139 712 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 ARL4AP4-201ENST00000434170 518 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AL356276.2-201ENST00000435919 558 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC010683.1-201ENST00000473673 378 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 NPM1P47-201ENST00000560843 856 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 MIR4458-201ENST00000578872 75 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC022884.3-201ENST00000579571 248 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 RNU4-89P-201ENST00000607443 133 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AC009452.1-201ENST00000640823 606 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 OR5BE1P-202ENST00000641168 1176 ntBASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms