Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP002512.4-202ENST00000641599 4530 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 SNX18P3-202ENST00000565670 1750 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CHD8Q9HCK8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.53□□□□□ -1.85
CHD8Q9HCK8 SNORD35B-201ENST00000363660 87 ntBASIC3.53□□□□□ -1.85
CHD8Q9HCK8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.53□□□□□ -1.85
CHD8Q9HCK8 HSPE1P27-201ENST00000430808 296 ntBASIC3.53□□□□□ -1.85
CHD8Q9HCK8 SEPT7P6-201ENST00000469999 1143 ntBASIC3.53□□□□□ -1.85
CHD8Q9HCK8 RPL23AP37-201ENST00000479658 549 ntBASIC3.53□□□□□ -1.85
CHD8Q9HCK8 PHBP14-201ENST00000512887 367 ntBASIC3.53□□□□□ -1.85
CHD8Q9HCK8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.53□□□□□ -1.85
CHD8Q9HCK8 QTRT1P1-201ENST00000604344 1078 ntBASIC3.53□□□□□ -1.85
CHD8Q9HCK8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CHD8Q9HCK8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 RPL7P60-201ENST00000397636 735 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 SNRPCP3-201ENST00000474888 476 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 HMGB2P1-201ENST00000591146 634 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 AC006116.10-201ENST00000591836 581 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 HSPA8P17-201ENST00000427029 1382 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 ZNF812P-201ENST00000457674 1694 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 SNORD66.1-201ENST00000391230 76 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 RNU4-64P-201ENST00000410795 131 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 SETP5-201ENST00000437270 562 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 AC026368.1-201ENST00000614934 690 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 AC079684.1-201ENST00000621405 437 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD8Q9HCK8 AL596275.2-208ENST00000641192 594 ntBASIC3.52□□□□□ -1.85
CHD8Q9HCK8 AC007656.2-201ENST00000624902 4547 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC021755.1-201ENST00000559747 1447 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 BX276092.3-201ENST00000424182 230 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 HMGB1P37-201ENST00000439613 609 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC006511.1-201ENST00000470614 315 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC023389.2-201ENST00000580031 955 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC084036.1-201ENST00000609190 508 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC100778.3-201ENST00000580060 1750 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC080128.1-201ENST00000474389 1917 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AL031736.2-201ENST00000426573 787 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 IFNA11P-201ENST00000446352 526 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 OR52Y1P-201ENST00000452418 828 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 OR11H5P-201ENST00000554039 926 ntBASIC3.51□□□□□ -1.85
CHD8Q9HCK8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CHD8Q9HCK8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD8Q9HCK8 RPF2P1-201ENST00000424137 906 ntBASIC3.5□□□□□ -1.85
CHD8Q9HCK8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms