Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC009452.1-201ENST00000640823 606 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.88□□□□□ -1.63
UPF2Q9HAU5 AC074029.4-201ENST00000624796 1859 ntBASIC4.88□□□□□ -1.63
UPF2Q9HAU5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 RNU6-650P-201ENST00000365658 111 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AL034403.1-201ENST00000399414 885 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 RPS3AP23-201ENST00000401762 784 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 RANP4-201ENST00000413361 655 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 RPL23AP4-201ENST00000427757 463 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC007563.3-201ENST00000433233 371 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 MTND2P21-201ENST00000436242 1042 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AL645638.1-201ENST00000440519 361 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 RPL38P1-201ENST00000460914 211 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 NAMPTP2-201ENST00000505629 1115 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 IGBP1P5-201ENST00000507524 1000 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 OR4V1P-201ENST00000525394 1140 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 TRAV8-5-201ENST00000537369 341 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AL133457.1-201ENST00000564251 987 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC090312.1-201ENST00000580637 348 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC006116.7-201ENST00000590141 756 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC023813.4-201ENST00000607580 580 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AL139089.1-201ENST00000620372 975 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 MIR6730-201ENST00000622213 67 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC068880.4-201ENST00000623082 495 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC010608.3-201ENST00000625048 527 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AP003485.1-201ENST00000625093 753 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AL356118.1-201ENST00000635272 1078 ntBASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF2Q9HAU5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 RN7SKP103-201ENST00000363848 320 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 HLFP1-201ENST00000402375 499 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 RPL23AP1-201ENST00000428990 471 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 HIGD1AP4-201ENST00000430194 280 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 RPS3AP54-201ENST00000435535 734 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AL157884.3-201ENST00000448273 1184 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC009963.2-201ENST00000453431 138 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AL513533.1-201ENST00000453728 415 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC037198.2-201ENST00000478845 733 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 HAUS1P1-201ENST00000505275 832 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC010460.2-201ENST00000509054 677 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 HMGB1P47-201ENST00000511281 589 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC093770.1-201ENST00000511559 571 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC018797.3-201ENST00000513388 1241 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC138701.1-201ENST00000524329 714 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC092747.2-201ENST00000545069 983 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 NOP56P3-201ENST00000549457 385 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC087888.1-201ENST00000550884 1254 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 OR4G3P-201ENST00000633500 913 ntBASIC4.86□□□□□ -1.63
UPF2Q9HAU5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF2Q9HAU5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 MIR122-201ENST00000385044 85 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 HMGB3P19-201ENST00000403971 560 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC016769.2-201ENST00000414815 475 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms