Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AP001893.2-201ENST00000526949 202 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 OR8A2P-201ENST00000528631 952 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC091078.2-201ENST00000557145 559 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 HMGB1P33-201ENST00000563485 527 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 MIR4310-201ENST00000582950 57 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC060780.3-201ENST00000589464 80 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 MLECP1-201ENST00000615893 709 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 TCP11X1-202ENST00000622971 1372 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RARSP1-201ENST00000542842 1418 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 RPL31P1-201ENST00000398116 372 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 RPS3AP3-201ENST00000411933 242 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 USP9YP20-201ENST00000419224 558 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 RPL12P11-201ENST00000439970 501 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AP006222.1-205ENST00000450734 457 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 FABP3P2-201ENST00000453169 399 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 RPS23P2-201ENST00000463671 415 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC091564.1-201ENST00000464563 479 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC098583.1-201ENST00000480875 255 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AL035404.1-201ENST00000497982 568 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 IMPA1P1-201ENST00000510718 842 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 SNORD46.2-201ENST00000516021 102 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 RNU6-1261P-201ENST00000517194 104 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 CENPUP1-201ENST00000526649 1202 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC141257.3-201ENST00000572906 215 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC008521.2-201ENST00000591021 259 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 LINC02019-201ENST00000608605 2060 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AP004247.3-201ENST00000608682 624 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC108479.2-201ENST00000617314 601 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC110994.2-201ENST00000635481 492 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC112487.2-201ENST00000637950 304 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 AC104964.3-201ENST00000606115 2860 ntBASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SEC61A2Q9H9S3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC140479.2-201ENST00000421567 3130 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms