Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 LSM6P2-201ENST00000552208 177 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC090651.1-201ENST00000567865 634 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 RN7SL66P-201ENST00000582099 264 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC010591.1-201ENST00000603941 649 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC116312.1-201ENST00000606841 314 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC006924.1-201ENST00000610750 559 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 CR381572.1-201ENST00000625098 102 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC134503.1-201ENST00000633048 54 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AL662795.2-201ENST00000624252 3706 ntBASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
BHLHE41Q9C0J9 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL136984.1-201ENST00000607611 1893 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 Y_RNA.184-201ENST00000363884 108 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RN7SKP6-201ENST00000364795 319 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 SNORA75.4-201ENST00000391278 119 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 MIR548P-201ENST00000408336 84 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RNA5SP155-201ENST00000411154 129 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC006509.1-201ENST00000420788 634 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL645939.3-201ENST00000435408 225 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 YWHAZP8-201ENST00000436935 731 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC005229.2-201ENST00000456995 399 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC078785.3-201ENST00000476607 425 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RN7SL413P-201ENST00000482700 297 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RN7SL714P-201ENST00000487050 298 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RNU6-1170P-201ENST00000515974 106 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 IGHV4-55-201ENST00000520889 368 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 PSMA2P1-201ENST00000526365 646 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RPA2P3-201ENST00000533268 770 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC068714.1-201ENST00000559623 800 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC007494.1-201ENST00000562293 760 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC093249.1-201ENST00000567049 203 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL356432.3-201ENST00000568952 465 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 MIR4742-201ENST00000581069 85 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC098848.2-201ENST00000588023 330 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 FANCD2P2-201ENST00000437591 1400 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 HSPA8P18-201ENST00000439846 1928 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
BHLHE41Q9C0J9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
BHLHE41Q9C0J9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms