Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC092641.1-201ENST00000440229 772 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 TRIM60P18-201ENST00000441518 828 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 CDC27P1-201ENST00000445384 715 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AL035551.1-201ENST00000446931 348 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 ZNF114P1-201ENST00000453500 292 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC090638.1-201ENST00000498296 909 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-885P-201ENST00000516607 104 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 OR7K1P-201ENST00000546439 926 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC012414.6-201ENST00000568241 401 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC005341.1-201ENST00000571086 708 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC011840.5-201ENST00000582125 771 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC073648.5-201ENST00000603502 305 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC087752.4-201ENST00000605911 462 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC092354.1-201ENST00000606057 376 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AL121612.2-201ENST00000612261 482 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 MIR7844-201ENST00000616161 122 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC015914.2-201ENST00000618167 288 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC009509.4-201ENST00000619202 509 ntBASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
AMBRA1Q9C0C7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC005294.1-201ENST00000355509 281 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-492P-201ENST00000363035 104 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RNA5SP507-201ENST00000363603 121 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RNA5SP234-201ENST00000363916 119 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 SUGT1P1-201ENST00000379514 476 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 SNORD116-23-201ENST00000384645 92 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 OR8V1P-201ENST00000395193 873 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 ATP5F1P4-201ENST00000397288 746 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 DEFB108C-201ENST00000400154 252 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 CYCSP45-201ENST00000402289 315 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 OR4K12P-201ENST00000406538 961 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AL513175.1-201ENST00000431492 780 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AL390119.1-201ENST00000440329 312 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC105399.1-202ENST00000447303 205 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AL133244.1-201ENST00000456007 258 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 CFTRP1-201ENST00000456646 183 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL860P-201ENST00000473738 223 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL826P-201ENST00000479724 288 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC090071.1-201ENST00000507713 644 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RN7SKP99-201ENST00000517028 307 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC122134.1-201ENST00000565664 1104 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 MTATP6P3-201ENST00000581686 676 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL435P-201ENST00000584418 282 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC090181.2-201ENST00000602975 672 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC104785.1-201ENST00000603220 588 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC106028.5-201ENST00000610332 395 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC100793.4-201ENST00000613683 429 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RPSAP73-201ENST00000614820 330 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AL121873.1-201ENST00000616013 524 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC074140.1-201ENST00000621617 208 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC015871.5-202ENST00000623252 701 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 MKKS-204ENST00000639674 192 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms