Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 RPL21P10-201ENST00000463521 490 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC010469.1-201ENST00000463864 576 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 RPL5P30-201ENST00000465511 891 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC025554.1-201ENST00000505641 188 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 IGKV2-38-201ENST00000517443 247 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 OR7E13P-201ENST00000526052 910 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 MIR4513-201ENST00000581077 86 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC015813.4-201ENST00000610469 179 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 BTBD10P1-201ENST00000549824 1352 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 AC068254.2-201ENST00000623938 3577 ntBASIC5.62□□□□□ -1.51
SCAPERQ9BY12 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCAPERQ9BY12 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 SAMMSON-213ENST00000641336 1521 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AJ239321.1-201ENST00000424255 564 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AL512649.1-201ENST00000428997 581 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 HLA-N-201ENST00000437516 135 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC025445.1-201ENST00000502728 300 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC008802.1-201ENST00000519121 791 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 CYP4A43P-201ENST00000568156 121 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 AC133552.5-201ENST00000604266 540 ntBASIC5.61□□□□□ -1.51
SCAPERQ9BY12 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCAPERQ9BY12 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AC000123.3-201ENST00000624029 4975 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 SNORA48.5-201ENST00000391143 135 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 GSTM3P2-201ENST00000412746 530 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 RPL7P44-201ENST00000424827 742 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 RPL26P28-201ENST00000451325 435 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 RN7SL585P-201ENST00000470538 280 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AC084198.1-201ENST00000477747 402 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 RPL7P23-201ENST00000493874 747 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AC113430.1-201ENST00000506872 718 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 MIR5186-201ENST00000577504 120 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 AL451049.1-201ENST00000608672 497 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 MIR7112-201ENST00000616126 65 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 CDY11P-201ENST00000447168 1651 ntBASIC5.6□□□□□ -1.51
SCAPERQ9BY12 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SCAPERQ9BY12 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 MIR1289-1-201ENST00000408836 144 ntBASIC5.59□□□□□ -1.51
SCAPERQ9BY12 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 AC108941.1-201ENST00000502853 530 ntBASIC5.59□□□□□ -1.51
SCAPERQ9BY12 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 AP000553.6-201ENST00000641242 118 ntBASIC5.59□□□□□ -1.51
SCAPERQ9BY12 MTCO1P46-201ENST00000451639 1491 ntBASIC5.59□□□□□ -1.51
SCAPERQ9BY12 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 AL035425.3-201ENST00000564206 4996 ntBASIC5.59□□□□□ -1.51
SCAPERQ9BY12 AC097504.1-201ENST00000515103 2415 ntBASIC5.59□□□□□ -1.51
SCAPERQ9BY12 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SCAPERQ9BY12 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SCAPERQ9BY12 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SCAPERQ9BY12 RNU4-35P-201ENST00000362588 141 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 RNU6-1279P-201ENST00000383917 103 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 DBIP2-201ENST00000419076 262 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 AC245054.1-201ENST00000420944 258 ntBASIC5.58□□□□□ -1.52
SCAPERQ9BY12 MTCO1P45-201ENST00000431457 267 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms