Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC091515.1-201ENST00000548110 679 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 MIR4644-201ENST00000579929 84 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 MIR5684-201ENST00000585074 65 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AL031666.3-201ENST00000609320 1006 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC139769.3-201ENST00000618383 175 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AP005264.7-201ENST00000625003 745 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC009452.1-201ENST00000640823 606 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 RLIMP1-201ENST00000339626 1680 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 SNORD35B-201ENST00000363660 87 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 RNA5SP39-201ENST00000411245 120 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC013404.1-201ENST00000413068 249 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 TPT1P2-201ENST00000413105 503 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC093698.1-201ENST00000423843 571 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC009965.2-201ENST00000425328 970 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 OR5BE1P-201ENST00000425977 939 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 HLA-N-201ENST00000437516 135 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 RPL7P48-201ENST00000461513 746 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 HMGB1P3-201ENST00000502802 616 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 KRT19P6-201ENST00000510983 209 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC025627.2-201ENST00000576220 160 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 VN1R79P-201ENST00000593540 513 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC055764.2-201ENST00000610089 670 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC011472.4-201ENST00000615848 491 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC009032.1-201ENST00000617574 431 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC068831.8-201ENST00000620171 435 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 AC007342.8-201ENST00000623278 678 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 OR5BE1P-202ENST00000641168 1176 ntBASIC4.22□□□□□ -1.73
RPRD1AQ96P16 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RPRD1AQ96P16 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RPRD1AQ96P16 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RPRD1AQ96P16 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.21□□□□□ -1.73
RPRD1AQ96P16 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RPRD1AQ96P16 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 FABP12P1-201ENST00000401911 322 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 RPL21P65-201ENST00000406094 466 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 PGBD4P8-201ENST00000412993 562 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 MTND4P11-201ENST00000417020 1058 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 YY1P1-201ENST00000427625 668 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 DYNLL1P7-201ENST00000429273 258 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 RPL21P133-201ENST00000443666 476 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC006326.1-201ENST00000445465 787 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 HSFY6P-201ENST00000445573 403 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 RPL23AP12-201ENST00000467573 473 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 RN7SKP21-201ENST00000516503 220 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 RNU7-143P-201ENST00000516781 65 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AGGF1P6-201ENST00000569213 976 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC012417.1-201ENST00000582307 1039 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AC114878.2-201ENST00000604863 1251 ntBASIC4.21□□□□□ -1.74
RPRD1AQ96P16 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.21□□□□□ -1.74
RPRD1AQ96P16 AL669942.2-201ENST00000620352 697 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms