Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 ISCA1P6-201ENST00000427740 390 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 NANOGP6-201ENST00000429190 847 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC079448.1-201ENST00000449377 373 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AP006222.1-205ENST00000450734 457 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC144530.1-201ENST00000452862 555 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 MTCO1P42-201ENST00000457379 726 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC087312.1-201ENST00000471411 480 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AP000648.1-201ENST00000529682 397 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 HSPE1P2-201ENST00000554777 306 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AL512360.1-201ENST00000555346 234 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC025678.1-201ENST00000567861 338 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC017100.2-201ENST00000584628 355 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 NRBF2P1-201ENST00000587407 859 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 TPMTP1-201ENST00000592307 737 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 COX6CP7-201ENST00000597056 208 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 BCRP9-201ENST00000605312 388 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC007497.1-201ENST00000610421 561 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 SNX18P12-201ENST00000624821 759 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AC097461.1-201ENST00000568928 2821 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 AL359955.1-201ENST00000455242 3275 ntBASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD1Q96NR3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RNU6-1085P-201ENST00000363576 107 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RN7SKP15-201ENST00000364742 309 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RNU6-769P-201ENST00000384407 104 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RNU11-201ENST00000387069 134 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 SNORA11.3-201ENST00000408471 128 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RNU2-65P-201ENST00000410162 185 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 DPPA2P2-201ENST00000418220 897 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC002486.1-201ENST00000435098 391 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RPS12P17-201ENST00000438591 377 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC073909.1-201ENST00000447112 999 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL118496.2-201ENST00000448300 230 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 HMGB1P4-201ENST00000455362 567 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RPL37P3-201ENST00000456825 293 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RPL7AP52-201ENST00000458096 790 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC011476.1-201ENST00000466725 307 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC079382.1-201ENST00000493346 557 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 HMGN1P12-201ENST00000499125 195 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC018710.1-201ENST00000506509 158 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC114786.4-201ENST00000508771 728 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RNU2-46P-201ENST00000517038 113 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms