Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL589994.1-201ENST00000404962 340 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 RPL7P52-201ENST00000449200 742 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AL645937.3-201ENST00000453647 936 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC007967.1-201ENST00000455422 1159 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC068587.1-201ENST00000483613 781 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC084337.1-201ENST00000524809 686 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC026464.5-201ENST00000562497 722 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 MIR4666A-201ENST00000580160 79 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC100812.1-201ENST00000607622 580 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC098479.1-201ENST00000609225 154 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 WBP11P1-201ENST00000562560 1931 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC007342.7-201ENST00000624610 2337 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 LINC01616-201ENST00000561816 2280 ntBASIC7.21□□□□□ -1.25
TRIM47Q96LD4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM47Q96LD4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 Y_RNA.112-201ENST00000363250 102 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 SNORA58B-201ENST00000364259 136 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 SNORA69-201ENST00000383895 132 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 U8.14-201ENST00000390843 143 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 EI24P3-201ENST00000399046 1062 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 MIR1203-201ENST00000408812 85 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RNU2-42P-201ENST00000410697 113 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 CYCSP52-201ENST00000422857 310 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC133104.1-201ENST00000429100 218 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC096644.2-201ENST00000429278 159 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RPL31P35-201ENST00000431058 377 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AL160004.2-201ENST00000432935 350 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 PCBP2P1-201ENST00000437262 977 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AL163193.1-201ENST00000444895 788 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC012512.1-201ENST00000446594 718 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC005002.1-201ENST00000447458 540 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AL445665.1-202ENST00000452436 324 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RPS27AP17-201ENST00000463344 455 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RN7SL515P-201ENST00000463999 297 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 VN1R17P-201ENST00000472048 1090 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 Y_RNA.672-201ENST00000516289 104 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RN7SKP31-201ENST00000516354 278 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RNU6-255P-201ENST00000516957 105 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 RNU6-1314P-201ENST00000517139 104 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 IGKV2-18-201ENST00000522607 343 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AP000790.1-201ENST00000528891 737 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AP000676.2-201ENST00000529711 301 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 NIFKP8-201ENST00000560500 874 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AP005119.1-201ENST00000580956 292 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AL008723.3-201ENST00000608926 449 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AP006248.2-201ENST00000623309 592 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 AC021242.1-201ENST00000507315 2035 ntBASIC7.21□□□□□ -1.26
TRIM47Q96LD4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms