Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC093311.1-201ENST00000506586 2021 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
ECHDC3Q96DC8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MIR93-201ENST00000385024 80 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MIR513A2-201ENST00000385249 127 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MIR1251-201ENST00000408552 70 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 RNA5SP239-201ENST00000410218 129 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 NPM1P24-201ENST00000428039 894 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 FTH1P6-201ENST00000430768 320 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 RNA5SP179-201ENST00000517284 121 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC087369.1-201ENST00000520775 996 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MIR4286-201ENST00000580651 93 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 MIR4512-201ENST00000583257 77 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC091167.4-201ENST00000605079 184 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AL592436.1-201ENST00000605135 558 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC124312.6-202ENST00000623624 418 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 CDRT1-208ENST00000630868 794 ntBASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ECHDC3Q96DC8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC068254.2-201ENST00000623938 3577 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 RHOT1P2-201ENST00000366423 333 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 MIR320B1-201ENST00000390209 79 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 RPL31P52-201ENST00000407532 367 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 HIGD1AP4-201ENST00000430194 280 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC007563.3-201ENST00000433233 371 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL645939.1-201ENST00000453429 797 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC005229.2-201ENST00000456995 399 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 RPS4XP15-201ENST00000489210 795 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 ACTR6P1-201ENST00000514311 1104 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AGGF1P6-201ENST00000569213 976 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC099676.1-201ENST00000608886 657 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL391834.1-201ENST00000609609 560 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC016957.2-201ENST00000616998 848 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AL645927.2-201ENST00000618350 349 ntBASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ECHDC3Q96DC8 AC007529.1-201ENST00000418574 2178 ntBASIC3.97□□□□□ -1.77
ECHDC3Q96DC8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ECHDC3Q96DC8 AC017002.4-201ENST00000604721 1525 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms