Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS1Q92902 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.51□□□□□ -1.37
HPS1Q92902 RN7SL145P-201ENST00000469955 296 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 RPL21P42-201ENST00000488408 464 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 GAPDHP62-201ENST00000515313 990 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 RN7SKP242-201ENST00000515967 289 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS1Q92902 AP000907.2-201ENST00000530827 353 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 SULT1C2P1-202ENST00000562418 459 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 AC084783.1-201ENST00000565846 910 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 AC018552.3-201ENST00000567416 561 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS1Q92902 AC010620.2-201ENST00000600135 313 ntBASIC6.51□□□□□ -1.37
HPS1Q92902 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS1Q92902 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.51□□□□□ -1.37
HPS1Q92902 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HPS1Q92902 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS1Q92902 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS1Q92902 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HPS1Q92902 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.51□□□□□ -1.37
HPS1Q92902 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HPS1Q92902 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS1Q92902 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.51□□□□□ -1.37
HPS1Q92902 CDY19P-201ENST00000411668 1613 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 AC112255.1-201ENST00000624070 2493 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 RNA5SP389-201ENST00000362610 115 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RNA5SP226-201ENST00000362653 115 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RNU6-562P-201ENST00000362731 107 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RNA5SP378-201ENST00000363646 120 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RN7SKP257-201ENST00000364525 309 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RNU6-190P-201ENST00000384154 102 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RPSAP44-201ENST00000406712 884 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS1Q92902 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 AC068533.1-201ENST00000418542 415 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS1Q92902 CYP4F32P-201ENST00000426492 504 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 AC009299.1-201ENST00000429684 717 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 RPL23AP19-201ENST00000436229 369 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RPL36AP15-201ENST00000444514 266 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AL445466.1-201ENST00000448432 357 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 AL445687.2-201ENST00000458156 728 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 PABPC1P3-201ENST00000469174 459 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RPS4XP14-201ENST00000493072 781 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC097263.1-201ENST00000496795 606 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC079768.1-201ENST00000503181 711 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS1Q92902 AC116562.3-201ENST00000506136 177 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS1Q92902 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 AC011853.1-201ENST00000518911 454 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC068587.5-201ENST00000528506 175 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS1Q92902 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 COX6CP11-201ENST00000555293 229 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 RN7SL697P-201ENST00000582484 299 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HPS1Q92902 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS1Q92902 RPS28P1-201ENST00000604589 187 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS1Q92902 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS1Q92902 uc_338.12-201ENST00000616344 181 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.5□□□□□ -1.37
HPS1Q92902 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS1Q92902 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS1Q92902 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HPS1Q92902 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS1Q92902 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
HPS1Q92902 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HPS1Q92902 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HPS1Q92902 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS1Q92902 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS1Q92902 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.49□□□□□ -1.37
HPS1Q92902 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS1Q92902 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS1Q92902 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
HPS1Q92902 AC007996.1-201ENST00000620414 2821 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms