Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC021678.3-201ENST00000517893 476 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 HMGB1P42-201ENST00000532126 553 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AP003034.1-201ENST00000534621 422 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC096996.1-201ENST00000563813 325 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC104010.1-201ENST00000616889 150 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC010928.1-201ENST00000592477 1447 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 AC007842.1-201ENST00000597336 2039 ntBASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD1Q8NHV4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 MFSD8-219ENST00000641228 2559 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC005294.1-201ENST00000355509 281 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 Y_RNA.231-201ENST00000364358 102 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 RNU6-31P-201ENST00000384388 108 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 RN7SKP293-201ENST00000411389 296 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 BMS1P17-202ENST00000416720 316 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 MTND5P27-201ENST00000428871 1720 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 DYNLL1P7-201ENST00000429273 258 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 YWHAEP5-201ENST00000431545 765 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC104634.1-201ENST00000452720 462 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 RN7SL717P-201ENST00000478343 297 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 RPL7P39-201ENST00000481157 744 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 HMGN2P25-201ENST00000486956 268 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SNX5P1-201ENST00000505757 1041 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SNORA43.3-201ENST00000517240 103 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC006115.2-201ENST00000596823 202 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC018695.5-201ENST00000605872 315 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC104118.1-201ENST00000607625 1589 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AL352984.2-201ENST00000611153 546 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC234782.5-201ENST00000617723 324 ntBASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEDD1Q8NHV4 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NEDD1Q8NHV4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms