Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 VDAC2P1-201ENST00000399358 958 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 HMGB3P18-201ENST00000406327 590 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RN7SKP106-201ENST00000410832 272 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-920P-201ENST00000410926 92 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC079809.1-201ENST00000415468 276 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 BX510359.2-201ENST00000417920 305 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 PAICSP7-201ENST00000419829 962 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RPL12P18-201ENST00000437175 325 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AL357520.1-201ENST00000441557 453 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 OR52E3P-201ENST00000452083 936 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RPL23AP56-201ENST00000460778 453 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 ABCC13-202ENST00000463099 3842 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 MTATP6P22-201ENST00000507369 598 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC109458.1-201ENST00000508858 316 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 ENPP7P9-201ENST00000514456 627 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-1308P-201ENST00000516817 103 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 MTND4LP26-201ENST00000518144 282 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 OR5G4P-201ENST00000525251 760 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC009852.2-201ENST00000567898 485 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 MIR4660-201ENST00000583549 74 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC020910.2-201ENST00000603635 610 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC067959.1-201ENST00000604334 379 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC018714.1-201ENST00000605028 208 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 VN1R74P-201ENST00000613259 503 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC100793.4-201ENST00000613683 429 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 MIR6853-201ENST00000619642 74 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 MIR6830-201ENST00000636015 70 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC002525.1-201ENST00000624392 1622 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC010928.1-201ENST00000592477 1447 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC139713.2-214ENST00000642059 1811 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC006210.2-201ENST00000367074 1545 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 DDX18P6-201ENST00000450119 1997 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 IL6STP1-201ENST00000346911 1020 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-543P-201ENST00000362576 108 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 OR1L1-202ENST00000373686 1083 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 SNORA2.3-201ENST00000383920 135 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 SNORA70.6-201ENST00000383934 134 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 Y_RNA.517-201ENST00000384551 106 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AL034403.1-201ENST00000399414 885 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 CHIAP3-201ENST00000423668 1133 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 DPRXP1-201ENST00000426312 460 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 NEK4P1-201ENST00000433383 879 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC092170.1-201ENST00000440211 356 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 HSPE1P22-201ENST00000456856 327 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC104763.1-201ENST00000475274 360 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 RPSAP51-201ENST00000497462 645 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC004069.2-201ENST00000505438 1114 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 BTG4P1-201ENST00000510421 183 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 HNRNPKP5-201ENST00000515300 253 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AL110118.1-201ENST00000553543 400 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 ATP5F1P7-201ENST00000567330 760 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 MIR3912-201ENST00000577566 105 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 BNIP3P30-201ENST00000601184 574 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC011453.2-201ENST00000603737 729 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-84P-201ENST00000607737 102 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AC025588.4-201ENST00000615802 908 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AL603750.1-201ENST00000624216 1717 ntBASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms