Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 TOMM20P2-201ENST00000540082 421 ntBASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC107954.1-201ENST00000565906 727 ntBASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 MIR5010-201ENST00000582846 120 ntBASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC010424.2-201ENST00000607594 443 ntBASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC116651.1-201ENST00000609724 556 ntBASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC01561Q8N1V8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 THAP12P4-201ENST00000528321 2266 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 MIR195-201ENST00000385194 87 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL079342.2-201ENST00000403367 482 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL133264.1-201ENST00000407157 562 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 RNA5SP56-201ENST00000410277 118 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 RN7SKP100-201ENST00000411258 284 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 BTF3P8-201ENST00000414577 526 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 PDSS1P1-201ENST00000422953 1114 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC007559.1-201ENST00000428736 355 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 CNOT7P1-201ENST00000429006 852 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC002069.1-201ENST00000429649 1159 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 RPL7L1P9-201ENST00000431298 745 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC005345.1-201ENST00000431868 217 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC092393.1-201ENST00000439625 742 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC069285.2-201ENST00000440210 275 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL161636.2-201ENST00000445179 927 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC000111.2-201ENST00000448200 210 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC010469.1-201ENST00000463864 576 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 RN7SL817P-201ENST00000480777 288 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AP001317.1-201ENST00000531194 960 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC087477.6-201ENST00000559595 843 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 VN1R79P-201ENST00000593540 513 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC007687.1-201ENST00000602704 304 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 GAS5-AS1-201ENST00000602767 694 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC105254.2-201ENST00000603636 436 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL589674.2-201ENST00000604304 337 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL139286.1-201ENST00000604465 483 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL499605.1-201ENST00000604628 403 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL121932.1-201ENST00000605542 214 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL354976.1-201ENST00000613843 387 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL109620.1-201ENST00000618738 1197 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AL359742.1-201ENST00000622497 540 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AF001550.2-201ENST00000636643 217 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 CASC19-264ENST00000641912 1184 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 AC105074.1-201ENST00000623380 3095 ntBASIC3.26□□□□□ -1.89
LINC01561Q8N1V8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms