Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 UBTFL10-201ENST00000528532 562 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 MTND3P13-201ENST00000574391 343 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 MTND3P19-201ENST00000603825 345 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC107952.2-201ENST00000606048 486 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC090948.2-201ENST00000607363 564 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC100847.1-201ENST00000611316 481 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC231759.1-201ENST00000616455 597 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC016717.3-201ENST00000624730 554 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AC046144.1-201ENST00000478559 1853 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 MTND4P8-201ENST00000514997 1362 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 AL592148.3-201ENST00000608771 2646 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 CASC19-206ENST00000641028 1430 ntBASIC4.89□□□□□ -1.63
SCN4BQ8IWT1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC000367.1-201ENST00000452711 1766 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC021146.4-201ENST00000309229 279 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL080315.1-201ENST00000406055 466 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 SETP15-201ENST00000412724 337 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL121878.1-201ENST00000418638 859 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC010099.3-201ENST00000423896 409 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC073069.1-201ENST00000428657 441 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC016712.1-201ENST00000431088 378 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 MTND6P18-201ENST00000439477 513 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 PTENP1-201ENST00000447117 1215 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC013356.1-201ENST00000489027 564 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 RN7SL346P-201ENST00000491561 294 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC113347.3-201ENST00000509113 148 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC044913.1-201ENST00000557200 430 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC090751.1-201ENST00000566966 267 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 MIR5708-201ENST00000579723 85 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 MIR5096-201ENST00000583713 70 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC015688.2-201ENST00000584523 262 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC007349.4-201ENST00000608114 532 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC099676.1-201ENST00000608886 657 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 MIR6798-201ENST00000612887 67 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL353726.1-201ENST00000614041 1000 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AL133243.1-201ENST00000614487 366 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC123768.4-201ENST00000616244 701 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC019226.2-201ENST00000625973 424 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 AC139713.2-214ENST00000642059 1811 ntBASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4BQ8IWT1 ASNSP1-201ENST00000518311 1939 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 AL359922.3-201ENST00000624779 1670 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 MIR129-1-201ENST00000384972 72 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 AC119751.3-201ENST00000399720 670 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 FCF1P5-201ENST00000406490 482 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 RPL31P52-201ENST00000407532 367 ntBASIC4.87□□□□□ -1.63
SCN4BQ8IWT1 RN7SKP247-201ENST00000411094 308 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms