Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AL024507.1-201ENST00000412741 274 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 VDAC1P9-201ENST00000412766 841 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 UBE2V1P9-201ENST00000414760 368 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 RPL21P91-201ENST00000429231 479 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AL592437.1-201ENST00000443781 492 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC044797.1-201ENST00000445744 679 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 RPS6P2-201ENST00000454208 705 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 ISCUP1-201ENST00000454451 448 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 CDC42P1-201ENST00000456658 548 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 RPL7P32-201ENST00000457119 744 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC104763.1-201ENST00000475274 360 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC091959.2-201ENST00000477363 321 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC013356.1-201ENST00000489027 564 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 MTND4LP2-201ENST00000502312 285 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC093840.1-201ENST00000511599 336 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC233280.2-201ENST00000603917 1070 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC005191.1-201ENST00000603950 358 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC005156.1-201ENST00000613371 573 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AL133243.1-201ENST00000614487 366 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC083809.1-201ENST00000615051 472 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AP005019.3-201ENST00000620418 560 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC090229.1-201ENST00000590983 1609 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 LINC01109-201ENST00000603837 3081 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 U3.22-201ENST00000391120 215 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 FABP12P1-201ENST00000401911 322 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 NUP35P2-201ENST00000416748 943 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 TAF13P2-201ENST00000416876 286 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC008065.1-201ENST00000428525 348 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 NPM1P34-201ENST00000428821 893 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 RPL7AP28-201ENST00000464513 571 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC126121.1-201ENST00000482313 553 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC026979.1-201ENST00000492525 396 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC090071.1-201ENST00000507713 644 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AF279873.1-201ENST00000523393 313 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC006518.2-201ENST00000542513 940 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 PARP1P2-201ENST00000556806 195 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 NIFKP8-201ENST00000560500 874 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC027455.1-201ENST00000574104 594 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AC013468.1-201ENST00000608680 598 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AL035461.2-201ENST00000619201 524 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 MIR6715B-201ENST00000637172 77 ntBASIC4.66□□□□□ -1.66
PRPF39Q86UA1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
PRPF39Q86UA1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms