Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TVP23CP2-201ENST00000571473 623 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AP001029.3-201ENST00000588063 596 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AL391813.2-201ENST00000609113 322 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AL162373.1-201ENST00000620433 407 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AP001264.1-201ENST00000620602 703 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 SNX18P10-201ENST00000625014 519 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 TNPO1P2-201ENST00000426249 2665 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 Y_RNA.5-201ENST00000362334 102 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RNA5SP333-201ENST00000363466 118 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-1188P-201ENST00000363795 107 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RNA5SP334-201ENST00000364825 118 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 Y_RNA.307-201ENST00000365022 117 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 Y_RNA.414-201ENST00000384011 101 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RPL37P10-201ENST00000412884 288 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AL590609.2-201ENST00000421430 368 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC079781.2-201ENST00000446424 169 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 MIR2053-201ENST00000459295 91 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RN7SL413P-201ENST00000482700 297 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-410P-201ENST00000517006 107 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RN7SKP183-201ENST00000517169 324 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC107934.1-201ENST00000522215 217 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AP001804.3-201ENST00000525146 880 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC107958.1-201ENST00000556576 290 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 MIR3942-201ENST00000585264 109 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC004805.3-201ENST00000603178 310 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AL359091.2-201ENST00000609303 556 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC130324.3-201ENST00000614165 542 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC062022.1-201ENST00000451026 1684 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AC011493.1-201ENST00000596753 1632 ntBASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.54□□□□□ -1.36
LYSMD3Q7Z3D4 LCOR-201ENST00000286067 4542 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC025125.1-201ENST00000624743 1922 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-522P-201ENST00000364497 107 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms