Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.82□□□□□ -1.8
RTL4Q6ZR62 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 AGGF1P6-201ENST00000569213 976 ntBASIC3.82□□□□□ -1.8
RTL4Q6ZR62 PSMA6P4-201ENST00000603247 718 ntBASIC3.82□□□□□ -1.8
RTL4Q6ZR62 ABI1P1-201ENST00000603375 1120 ntBASIC3.82□□□□□ -1.8
RTL4Q6ZR62 AP005264.7-201ENST00000625003 745 ntBASIC3.82□□□□□ -1.8
RTL4Q6ZR62 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
RTL4Q6ZR62 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RNA5SP479-201ENST00000364858 117 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 MT-TP-201ENST00000387461 68 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RNU11-4P-201ENST00000391149 133 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL034403.1-201ENST00000399414 885 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RNU6-628P-201ENST00000410675 107 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL356095.1-201ENST00000417217 199 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC017083.1-201ENST00000428093 483 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 USP9YP7-201ENST00000436723 430 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL353093.1-201ENST00000441292 436 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 USP9YP32-201ENST00000452432 430 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RPL36AP13-201ENST00000457490 317 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RPL7P1-201ENST00000468161 747 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RPL7P9-201ENST00000468715 747 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL132838.2-201ENST00000492041 314 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 HPRT1P2-201ENST00000505250 544 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 NPM1P35-201ENST00000533043 868 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC141257.3-201ENST00000572906 215 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC110743.1-201ENST00000584870 478 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC067959.1-201ENST00000604334 379 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL049634.3-201ENST00000604968 457 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC010857.1-201ENST00000606398 594 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC107905.1-201ENST00000616204 426 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AL590410.1-201ENST00000617925 333 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 RNA5SP196-201ENST00000625967 102 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC007342.7-201ENST00000624610 2337 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
RTL4Q6ZR62 AC116667.1-201ENST00000604855 2072 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 OR11H4-201ENST00000315409 1082 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 RNU6-386P-201ENST00000362650 107 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 RNA5SP130-201ENST00000364431 114 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 SNORA57.1-201ENST00000391227 145 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC093716.1-201ENST00000435923 377 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AF228730.2-201ENST00000438784 848 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 RNU6-1218P-201ENST00000458990 108 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 HMGN1P8-201ENST00000463578 288 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 FTH1P2-201ENST00000466086 412 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 SEC11B-201ENST00000518383 499 ntBASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTL4Q6ZR62 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms