Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR2AO1P-201ENST00000476497 403 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RN7SL547P-201ENST00000490793 290 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RPS23P1-201ENST00000491662 432 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 HMGB1P28-201ENST00000507778 552 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 SCARNA6.1-201ENST00000516989 238 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC025260.1-201ENST00000548858 430 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL109766.1-201ENST00000555080 552 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 HMGN1P30-201ENST00000589286 268 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC011497.2-201ENST00000600255 639 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC005618.4-201ENST00000625053 554 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 DDX18P6-201ENST00000450119 1997 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 Y_RNA.31-201ENST00000362574 102 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AL953862.1-201ENST00000423016 168 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 RPS27AP6-201ENST00000427962 448 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 RPL23AP16-201ENST00000441715 421 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC010307.1-201ENST00000467206 836 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 RPS3AP50-201ENST00000487064 803 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC009120.1-201ENST00000493458 473 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC112204.1-201ENST00000502591 103 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC024558.1-201ENST00000505008 528 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 RNU6-1308P-201ENST00000516817 103 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 RN7SKP256-201ENST00000517201 314 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC013828.2-201ENST00000532487 235 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 OR10G5P-201ENST00000532733 358 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC068587.4-201ENST00000533893 186 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC063950.1-201ENST00000552036 308 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 SUB1P2-201ENST00000556401 297 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 NBPF8-201ENST00000583271 5330 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC007842.1-201ENST00000597336 2039 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC084781.2-201ENST00000615568 161 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AC022106.2-201ENST00000620114 757 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 AP003119.3-201ENST00000566747 4192 ntBASIC7.48□□□□□ -1.21
RC3H1Q5TC82 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.48□□□□□ -1.21
RC3H1Q5TC82 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC127070.3-201ENST00000503695 3263 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 GNG5P1-201ENST00000255500 204 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms