Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC144BQ3MJ40 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC005005.4-201ENST00000623789 16698 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 SNRPEP3-201ENST00000338402 276 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AL023807.1-201ENST00000407932 359 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 RN7SKP182-201ENST00000410772 298 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 PIGPP2-201ENST00000411569 458 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 COX5BP7-201ENST00000414780 274 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 NUP35P2-201ENST00000416748 943 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 BX119904.4-201ENST00000424402 301 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 ELOCP8-201ENST00000439309 332 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 ELOCP15-201ENST00000442090 332 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC118469.1-201ENST00000442943 488 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 TCEA1P3-201ENST00000443005 880 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 MTND2P4-201ENST00000445034 1004 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 IGBP1P3-201ENST00000447449 1000 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AL591623.2-201ENST00000449978 222 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 HIGD1AP8-201ENST00000453927 274 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC021660.1-201ENST00000465006 554 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC009127.1-201ENST00000467090 155 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 OR4G11P-201ENST00000492842 939 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC005726.1-201ENST00000494679 427 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC110792.2-201ENST00000510278 224 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC098976.1-201ENST00000513014 541 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 HMGN1P9-201ENST00000515212 298 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 RNA5SP216-201ENST00000516111 123 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 RNY4P37-201ENST00000516225 96 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 SCARNA20.4-201ENST00000516969 131 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 MTCO1P49-201ENST00000523429 802 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC239860.2-201ENST00000525886 270 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC092490.3-201ENST00000545370 572 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AL389895.1-201ENST00000554127 252 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AL031667.3-201ENST00000620124 655 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC135068.5-201ENST00000624197 983 ntBASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC144BQ3MJ40 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 RNU6-984P-201ENST00000363236 109 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 Y_RNA.560-201ENST00000384689 102 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 QRSL1P2-201ENST00000418582 964 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 RPL12P17-201ENST00000432393 498 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC006466.1-201ENST00000438721 289 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 snoU13.7-201ENST00000459220 104 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC108161.1-201ENST00000461060 402 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC092757.1-201ENST00000467293 467 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC072039.1-201ENST00000477611 581 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 MYL12BP2-201ENST00000503948 512 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC026412.2-201ENST00000512270 1075 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 RN7SKP147-201ENST00000517154 244 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 DPRXP4-201ENST00000578053 568 ntBASIC6.07□□□□□ -1.44
CCDC144BQ3MJ40 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms