Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC093824.1-201ENST00000508796 343 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AC093770.1-201ENST00000511559 571 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC091515.1-201ENST00000548110 679 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC137768.1-201ENST00000549998 553 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC009101.1-201ENST00000568135 242 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC135803.1-201ENST00000608748 565 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AC104307.1-201ENST00000616142 196 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AP000843.1-201ENST00000624880 701 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.73□□□□□ -1.81
RFX4Q33E94 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.73□□□□□ -1.81
RFX4Q33E94 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX4Q33E94 DDX6P1-205ENST00000441966 1436 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 SNORD35B-201ENST00000363660 87 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 CCNB2P1-201ENST00000399411 1150 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 RPL31P52-201ENST00000407532 367 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX4Q33E94 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 BTBD7P2-201ENST00000441962 620 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AL157827.1-201ENST00000447622 132 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX4Q33E94 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AC068305.1-201ENST00000497406 726 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 HMGB1P3-201ENST00000502802 616 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 RNU6-1308P-201ENST00000516817 103 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 HIGD1AP18-201ENST00000520730 278 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AC105233.3-201ENST00000531125 744 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 TOMM20P2-201ENST00000540082 421 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX4Q33E94 AC068831.4-201ENST00000556118 109 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AGGF1P8-201ENST00000562979 1000 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 MIR4715-201ENST00000584117 79 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX4Q33E94 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX4Q33E94 VN1R79P-201ENST00000593540 513 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC005191.1-201ENST00000603950 358 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC114878.2-201ENST00000604863 1251 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC010857.1-201ENST00000606398 594 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 AC019193.2-201ENST00000610012 634 ntBASIC3.72□□□□□ -1.81
RFX4Q33E94 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX4Q33E94 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RFX4Q33E94 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX4Q33E94 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX4Q33E94 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RFX4Q33E94 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.81
RFX4Q33E94 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC007685.1-201ENST00000329806 452 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 SNORA62.2-201ENST00000364672 152 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFX4Q33E94 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFX4Q33E94 RNU6-244P-201ENST00000391028 104 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RFX4Q33E94 RN7SKP182-201ENST00000410772 298 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC016769.2-201ENST00000414815 475 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 CNOT7P1-201ENST00000429006 852 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX4Q33E94 HMGB1P37-201ENST00000439613 609 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX4Q33E94 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX4Q33E94 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX4Q33E94 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC098824.1-201ENST00000453565 980 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 NDUFA12P1-201ENST00000455914 406 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 RPL23AP24-201ENST00000458203 385 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 RPL7P1-201ENST00000468161 747 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 RPL7P9-201ENST00000468715 747 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX4Q33E94 RPS29P22-201ENST00000472363 168 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AF213884.1-201ENST00000488102 463 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms