Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC2.22□□□□□ -2.05
HSPG2P98160 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.22□□□□□ -2.05
HSPG2P98160 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.22□□□□□ -2.05
HSPG2P98160 AC097262.1-201ENST00000452559 548 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 AL109933.2-201ENST00000452651 260 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 NPM1P13-201ENST00000452663 865 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 SNRPCP3-201ENST00000474888 476 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 RPS3AP43-201ENST00000479743 781 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.22□□□□□ -2.05
HSPG2P98160 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.22□□□□□ -2.05
HSPG2P98160 OR2AS2P-201ENST00000606902 342 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HSPG2P98160 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 OTUD4P1-201ENST00000237841 3067 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC2.22□□□□□ -2.05
HSPG2P98160 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HSPG2P98160 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
HSPG2P98160 RN7SKP222-201ENST00000410651 315 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.21□□□□□ -2.05
HSPG2P98160 LIPT1P1-201ENST00000415870 1186 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 AC010095.1-201ENST00000443543 144 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 AC006445.1-201ENST00000491925 405 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 OR2A20P-203ENST00000498397 1268 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 AC091826.1-201ENST00000514065 313 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 Y_RNA.676-201ENST00000516393 96 ntBASIC2.21□□□□□ -2.05
HSPG2P98160 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.21□□□□□ -2.05
HSPG2P98160 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
HSPG2P98160 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.21□□□□□ -2.05
HSPG2P98160 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.21□□□□□ -2.05
HSPG2P98160 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 AC116096.1-201ENST00000566804 2314 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HSPG2P98160 AC007336.1-201ENST00000576365 3828 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 RNU1-70P-201ENST00000362618 164 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC010740.1-201ENST00000417035 684 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 BX842559.1-201ENST00000419615 532 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 ATP5HP2-201ENST00000433885 485 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.21□□□□□ -2.06
HSPG2P98160 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.21□□□□□ -2.06
HSPG2P98160 RPL7P38-201ENST00000488396 739 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC093755.1-201ENST00000512950 1023 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.21□□□□□ -2.06
HSPG2P98160 AC073657.2-201ENST00000605661 303 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AP003392.5-201ENST00000607857 415 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AL096803.3-201ENST00000609032 532 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AL732618.1-201ENST00000623251 301 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 AC108206.1-201ENST00000570186 4159 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 AP006437.1-201ENST00000641440 3685 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HSPG2P98160 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 SKP1P3-201ENST00000429280 487 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 NDUFB1P1-201ENST00000435191 180 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HSPG2P98160 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 AF228730.2-201ENST00000438784 848 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC132942.1-201ENST00000486753 483 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.21□□□□□ -2.06
HSPG2P98160 AC138938.1-201ENST00000515431 782 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AP003355.3-201ENST00000623465 114 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 AP000553.6-201ENST00000641242 118 ntBASIC2.21□□□□□ -2.06
HSPG2P98160 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 AL451142.2-201ENST00000429076 2090 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.2□□□□□ -2.06
HSPG2P98160 AC004656.1-201ENST00000568479 4951 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 AC007685.1-201ENST00000329806 452 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.2□□□□□ -2.06
HSPG2P98160 FTH1P1-201ENST00000437933 532 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 RPS15AP29-201ENST00000445539 400 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 FDX1P2-201ENST00000450769 375 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
HSPG2P98160 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.2□□□□□ -2.06
HSPG2P98160 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.2□□□□□ -2.06
HSPG2P98160 MIR3936-201ENST00000584304 110 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AL390816.3-201ENST00000604527 1066 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms