Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 AL929601.4-201ENST00000613011 1341 ntBASIC3.41□□□□□ -1.86
UBA52P62987 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.41□□□□□ -1.86
UBA52P62987 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UBA52P62987 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
UBA52P62987 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
UBA52P62987 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UBA52P62987 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBA52P62987 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBA52P62987 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
UBA52P62987 RNU6-1320P-201ENST00000390838 107 ntBASIC3.4□□□□□ -1.87
UBA52P62987 RNU6-1269P-201ENST00000391139 107 ntBASIC3.4□□□□□ -1.87
UBA52P62987 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.4□□□□□ -1.87
UBA52P62987 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.4□□□□□ -1.87
UBA52P62987 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
UBA52P62987 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.4□□□□□ -1.87
UBA52P62987 RNU6-599P-201ENST00000459383 107 ntBASIC3.4□□□□□ -1.87
UBA52P62987 RNU6-1193P-201ENST00000459461 107 ntBASIC3.4□□□□□ -1.87
UBA52P62987 RPL7P48-201ENST00000461513 746 ntBASIC3.4□□□□□ -1.87
UBA52P62987 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
UBA52P62987 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.4□□□□□ -1.87
UBA52P62987 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 FTH1P21-201ENST00000512179 511 ntBASIC3.4□□□□□ -1.87
UBA52P62987 RNA5SP73-201ENST00000516744 108 ntBASIC3.4□□□□□ -1.87
UBA52P62987 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.4□□□□□ -1.87
UBA52P62987 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 VN1R79P-201ENST00000593540 513 ntBASIC3.4□□□□□ -1.87
UBA52P62987 AC090912.3-201ENST00000609775 533 ntBASIC3.4□□□□□ -1.87
UBA52P62987 AC006946.3-201ENST00000609791 756 ntBASIC3.4□□□□□ -1.87
UBA52P62987 AC099669.2-201ENST00000616549 437 ntBASIC3.4□□□□□ -1.87
UBA52P62987 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
UBA52P62987 RNU6-368P-201ENST00000620928 107 ntBASIC3.4□□□□□ -1.87
UBA52P62987 RNU6-538P-201ENST00000622329 107 ntBASIC3.4□□□□□ -1.87
UBA52P62987 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.4□□□□□ -1.87
UBA52P62987 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.4□□□□□ -1.87
UBA52P62987 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 AC006504.1-201ENST00000562493 3666 ntBASIC3.39□□□□□ -1.87
UBA52P62987 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.39□□□□□ -1.87
UBA52P62987 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.39□□□□□ -1.87
UBA52P62987 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBA52P62987 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
UBA52P62987 RNU11-4P-201ENST00000391149 133 ntBASIC3.39□□□□□ -1.87
UBA52P62987 RNA5SP239-201ENST00000410218 129 ntBASIC3.39□□□□□ -1.87
UBA52P62987 RNA5SP44-201ENST00000410446 133 ntBASIC3.39□□□□□ -1.87
UBA52P62987 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.39□□□□□ -1.87
UBA52P62987 AC009237.5-201ENST00000414271 501 ntBASIC3.39□□□□□ -1.87
UBA52P62987 TRGV7-201ENST00000427089 353 ntBASIC3.39□□□□□ -1.87
UBA52P62987 SKP1P1-201ENST00000438081 489 ntBASIC3.39□□□□□ -1.87
UBA52P62987 RPL23AP46-201ENST00000438548 490 ntBASIC3.39□□□□□ -1.87
UBA52P62987 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.39□□□□□ -1.87
UBA52P62987 AL645939.1-201ENST00000453429 797 ntBASIC3.39□□□□□ -1.87
UBA52P62987 RPL23AP81-201ENST00000455252 467 ntBASIC3.39□□□□□ -1.87
UBA52P62987 RPL21P71-201ENST00000465598 459 ntBASIC3.39□□□□□ -1.87
UBA52P62987 AC098583.1-201ENST00000480875 255 ntBASIC3.39□□□□□ -1.87
UBA52P62987 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.39□□□□□ -1.87
UBA52P62987 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
UBA52P62987 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.39□□□□□ -1.87
UBA52P62987 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.39□□□□□ -1.87
UBA52P62987 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.39□□□□□ -1.87
UBA52P62987 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBA52P62987 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBA52P62987 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
UBA52P62987 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
UBA52P62987 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBA52P62987 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
UBA52P62987 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 SPATA2P1-201ENST00000431223 2055 ntBASIC3.39□□□□□ -1.87
UBA52P62987 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBA52P62987 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
UBA52P62987 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.38□□□□□ -1.87
UBA52P62987 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 RN7SKP285-201ENST00000410137 318 ntBASIC3.38□□□□□ -1.87
UBA52P62987 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.38□□□□□ -1.87
UBA52P62987 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 RPL7P53-201ENST00000421245 739 ntBASIC3.38□□□□□ -1.87
UBA52P62987 SEC63P1-201ENST00000425785 1258 ntBASIC3.38□□□□□ -1.87
UBA52P62987 MTCO1P51-201ENST00000427672 1060 ntBASIC3.38□□□□□ -1.87
UBA52P62987 AC017083.1-201ENST00000428093 483 ntBASIC3.38□□□□□ -1.87
UBA52P62987 KCTD9P3-201ENST00000434597 1169 ntBASIC3.38□□□□□ -1.87
UBA52P62987 AL356276.2-201ENST00000435919 558 ntBASIC3.38□□□□□ -1.87
UBA52P62987 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.38□□□□□ -1.87
UBA52P62987 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.38□□□□□ -1.87
UBA52P62987 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms