Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.31□□□□□ -1.72
SEC61A1P61619 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A1P61619 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SEC61A1P61619 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A1P61619 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SEC61A1P61619 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SEC61A1P61619 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 AP005901.5-201ENST00000545779 1796 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC108751.5-201ENST00000492880 1336 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SEC61A1P61619 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SEC61A1P61619 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 RN7SKP104-201ENST00000362605 328 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 RNU4-24P-201ENST00000364565 139 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 RNA5SP455-201ENST00000365190 119 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A1P61619 RNU6-317P-201ENST00000384031 107 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL590084.2-201ENST00000401481 382 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL645733.1-201ENST00000402250 217 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL138880.1-201ENST00000405824 642 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC004074.1-201ENST00000421810 1063 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 FABP7P1-201ENST00000424004 391 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 MTCO3P21-201ENST00000430791 643 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 MTCO3P5-201ENST00000433620 714 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 KCTD10P1-201ENST00000434203 625 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 RHOT1P3-201ENST00000436571 331 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL354941.1-201ENST00000438600 464 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 RPS26P2-201ENST00000440331 348 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A1P61619 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 MRPL42P4-201ENST00000453267 443 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AL109741.2-201ENST00000455561 343 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC005008.1-201ENST00000456151 612 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC00888-204ENST00000487386 421 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.3□□□□□ -1.72
SEC61A1P61619 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC116353.3-201ENST00000511215 249 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 RNA5SP360-201ENST00000516555 118 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A1P61619 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A1P61619 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 NDUFB4P11-201ENST00000560510 395 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 OR1F2P-201ENST00000570470 933 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 CYCSP40-201ENST00000575927 294 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 MIR4436B2-201ENST00000581415 91 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.3□□□□□ -1.72
SEC61A1P61619 MIR4436B1-201ENST00000583272 91 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.3□□□□□ -1.72
SEC61A1P61619 AC006539.2-201ENST00000601729 572 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC068790.7-201ENST00000602347 528 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC007494.3-201ENST00000624660 743 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC091965.5-201ENST00000624785 342 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 ATE1-AS1-202ENST00000636460 506 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 MFSD8-245ENST00000641743 948 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 AC015813.6-201ENST00000624409 5808 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.3□□□□□ -1.72
SEC61A1P61619 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.3□□□□□ -1.72
SEC61A1P61619 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SEC61A1P61619 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.29□□□□□ -1.72
SEC61A1P61619 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A1P61619 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A1P61619 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A1P61619 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.29□□□□□ -1.72
SEC61A1P61619 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A1P61619 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.29□□□□□ -1.72
SEC61A1P61619 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A1P61619 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A1P61619 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SEC61A1P61619 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.29□□□□□ -1.72
SEC61A1P61619 Y_RNA.201-201ENST00000364052 96 ntBASIC4.29□□□□□ -1.72
SEC61A1P61619 RNU6-707P-201ENST00000364647 95 ntBASIC4.29□□□□□ -1.72
SEC61A1P61619 MIR937-201ENST00000401271 86 ntBASIC4.29□□□□□ -1.72
SEC61A1P61619 AL109941.1-201ENST00000401925 229 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms