Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLRN1P58418 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CLRN1P58418 AC092162.3-201ENST00000624511 1624 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 CASC19-248ENST00000641674 1356 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 OR4G11P-202ENST00000642116 1414 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 RN7SKP226-201ENST00000364912 300 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 RNU5A-6P-201ENST00000384136 116 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 RNA5SP122-201ENST00000384457 108 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 BTF3P7-201ENST00000407097 488 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 HMGB3P23-201ENST00000414981 585 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL513325.1-201ENST00000417716 1034 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 USP9YP13-201ENST00000417797 480 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL356583.2-201ENST00000426536 280 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 RPL37P1-201ENST00000432310 284 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 NEK4P1-201ENST00000433383 879 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 NDUFB4P8-201ENST00000435351 367 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 OR6D1P-201ENST00000436165 939 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 MED28P3-201ENST00000444288 531 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 PAXBP1P1-201ENST00000449315 447 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL450023.1-201ENST00000450868 751 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 SNRPFP4-201ENST00000456366 242 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 RN7SL72P-201ENST00000460697 269 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 KRT19P6-201ENST00000510983 209 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 PAICSP4-201ENST00000517543 1253 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 AP000790.1-201ENST00000528891 737 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 ZNF519P2-201ENST00000557032 169 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC010547.6-201ENST00000571789 193 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC012616.1-201ENST00000600294 197 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 BNIP3P30-201ENST00000601184 574 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 PRELID3BP8-201ENST00000604148 295 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AC010857.1-201ENST00000606398 594 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
CLRN1P58418 AL359535.1-201ENST00000612100 1087 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AC091834.1-201ENST00000614543 472 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 CRYM-AS1-204ENST00000637983 556 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 OR2L1P-202ENST00000641567 1023 ntBASIC4.89□□□□□ -1.63
CLRN1P58418 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLRN1P58418 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
CLRN1P58418 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLRN1P58418 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.89□□□□□ -1.63
CLRN1P58418 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.89□□□□□ -1.63
CLRN1P58418 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLRN1P58418 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.89□□□□□ -1.63
CLRN1P58418 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 RNU6-444P-201ENST00000383988 108 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 RNU6-248P-201ENST00000410720 107 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AP000534.2-201ENST00000412729 568 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 PRELID3BP11-201ENST00000414230 479 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms