Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC006504.1-201ENST00000562493 3666 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.92□□□□□ -1.78
PKNOX1P55347 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PKNOX1P55347 RPL31P52-201ENST00000407532 367 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AC013404.1-201ENST00000413068 249 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 MTND4P11-201ENST00000417020 1058 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AL732292.1-201ENST00000426692 226 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AL160175.1-201ENST00000428124 247 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AC023141.6-201ENST00000429418 337 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 RPL7P4-203ENST00000430239 730 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.92□□□□□ -1.78
PKNOX1P55347 KCTD9P3-201ENST00000434597 1169 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.92□□□□□ -1.78
PKNOX1P55347 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.92□□□□□ -1.78
PKNOX1P55347 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 RPL23AP12-201ENST00000467573 473 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 RPS29P22-201ENST00000472363 168 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AC010683.1-201ENST00000473673 378 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AC007686.1-201ENST00000488511 463 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 RN7SL604P-201ENST00000492589 296 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC025459.1-201ENST00000504072 156 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 IGBP1P5-201ENST00000507524 1000 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AL049870.4-201ENST00000555741 486 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.92□□□□□ -1.78
PKNOX1P55347 AC015911.5-201ENST00000587076 451 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 AP000346.3-201ENST00000622821 210 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.92□□□□□ -1.78
PKNOX1P55347 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.92□□□□□ -1.78
PKNOX1P55347 NCAPGP1-201ENST00000505112 1814 ntBASIC3.92□□□□□ -1.78
PKNOX1P55347 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.92□□□□□ -1.78
PKNOX1P55347 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKNOX1P55347 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKNOX1P55347 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKNOX1P55347 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC009501.3-201ENST00000605001 1352 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PKNOX1P55347 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 IGKV7-3-201ENST00000357453 298 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 RPL23AP26-201ENST00000412728 464 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 NPM1P34-201ENST00000428821 893 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.91□□□□□ -1.78
PKNOX1P55347 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC108475.1-201ENST00000507880 950 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC026726.1-201ENST00000512859 601 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.91□□□□□ -1.78
PKNOX1P55347 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC141257.3-201ENST00000572906 215 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.91□□□□□ -1.78
PKNOX1P55347 MIR548Y-201ENST00000582739 110 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC090525.3-201ENST00000605601 189 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC012467.1-201ENST00000607740 256 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC003001.2-201ENST00000616294 831 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC025016.1-201ENST00000616746 682 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC124312.6-202ENST00000623624 418 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AL118508.4-201ENST00000624142 1176 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.91□□□□□ -1.78
PKNOX1P55347 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.91□□□□□ -1.78
PKNOX1P55347 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.91□□□□□ -1.78
PKNOX1P55347 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKNOX1P55347 UBE3AP2-201ENST00000429033 2259 ntBASIC3.91□□□□□ -1.78
PKNOX1P55347 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PKNOX1P55347 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PKNOX1P55347 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.9□□□□□ -1.78
PKNOX1P55347 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PKNOX1P55347 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.9□□□□□ -1.79
PKNOX1P55347 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
PKNOX1P55347 RNU6-883P-201ENST00000384597 107 ntBASIC3.9□□□□□ -1.79
PKNOX1P55347 HMGB3P19-201ENST00000403971 560 ntBASIC3.9□□□□□ -1.79
PKNOX1P55347 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.9□□□□□ -1.79
PKNOX1P55347 IFNNP1-201ENST00000429219 553 ntBASIC3.9□□□□□ -1.79
PKNOX1P55347 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
PKNOX1P55347 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms