Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC023512.1-201ENST00000444513 499 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.87□□□□□ -1.47
MRE11P49959 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.87□□□□□ -1.47
MRE11P49959 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 AL109741.2-201ENST00000455561 343 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC005008.1-201ENST00000456151 612 ntBASIC5.87□□□□□ -1.47
MRE11P49959 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.87□□□□□ -1.47
MRE11P49959 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.87□□□□□ -1.47
MRE11P49959 AC109927.2-201ENST00000506416 303 ntBASIC5.87□□□□□ -1.47
MRE11P49959 RFPL4AP5-201ENST00000514977 504 ntBASIC5.87□□□□□ -1.47
MRE11P49959 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.87□□□□□ -1.47
MRE11P49959 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 AP000889.1-201ENST00000530968 660 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.87□□□□□ -1.47
MRE11P49959 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 MIR4801-201ENST00000582704 82 ntBASIC5.87□□□□□ -1.47
MRE11P49959 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.87□□□□□ -1.47
MRE11P49959 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC078795.2-201ENST00000602835 1252 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC018618.2-201ENST00000604770 446 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC092653.1-201ENST00000608509 531 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC105227.2-201ENST00000615075 605 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AL158063.1-201ENST00000615349 536 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC109454.4-201ENST00000623411 649 ntBASIC5.87□□□□□ -1.47
MRE11P49959 RPL23AP61-201ENST00000623642 466 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC007494.3-201ENST00000624660 743 ntBASIC5.87□□□□□ -1.47
MRE11P49959 LINC01808-202ENST00000641680 1116 ntBASIC5.87□□□□□ -1.47
MRE11P49959 VPS35P1-201ENST00000563400 1518 ntBASIC5.87□□□□□ -1.47
MRE11P49959 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 CASC19-204ENST00000641001 2055 ntBASIC5.87□□□□□ -1.47
MRE11P49959 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
MRE11P49959 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 OR51H2P-202ENST00000641424 3046 ntBASIC5.86□□□□□ -1.47
MRE11P49959 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MRE11P49959 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 RNA5SP388-201ENST00000362584 119 ntBASIC5.86□□□□□ -1.47
MRE11P49959 RNU4-44P-201ENST00000363050 141 ntBASIC5.86□□□□□ -1.47
MRE11P49959 RNA5SP27-201ENST00000363839 119 ntBASIC5.86□□□□□ -1.47
MRE11P49959 RNU6-353P-201ENST00000364266 108 ntBASIC5.86□□□□□ -1.47
MRE11P49959 RNU1-74P-201ENST00000384108 171 ntBASIC5.86□□□□□ -1.47
MRE11P49959 Y_RNA.465-201ENST00000384293 102 ntBASIC5.86□□□□□ -1.47
MRE11P49959 ATP5HP3-201ENST00000396994 486 ntBASIC5.86□□□□□ -1.47
MRE11P49959 CHMP1B2P-201ENST00000399581 597 ntBASIC5.86□□□□□ -1.47
MRE11P49959 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.86□□□□□ -1.47
MRE11P49959 AC098592.1-201ENST00000419352 333 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.86□□□□□ -1.47
MRE11P49959 RBMY2QP-201ENST00000429799 1147 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC244035.1-201ENST00000430042 390 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 OR6D1P-201ENST00000436165 939 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 HMGB1P48-201ENST00000446155 598 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.86□□□□□ -1.47
MRE11P49959 HSPE1P22-201ENST00000456856 327 ntBASIC5.86□□□□□ -1.47
MRE11P49959 RNU7-140P-201ENST00000459546 60 ntBASIC5.86□□□□□ -1.47
MRE11P49959 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 RPL21P129-201ENST00000491732 478 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 AC006427.1-201ENST00000514359 712 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 OR11J2P-201ENST00000555298 907 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.86□□□□□ -1.47
MRE11P49959 AC116553.2-201ENST00000564203 463 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.86□□□□□ -1.47
MRE11P49959 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 AC068790.4-201ENST00000602474 263 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AP003465.2-201ENST00000602571 373 ntBASIC5.86□□□□□ -1.47
MRE11P49959 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AF246928.1-201ENST00000623768 87 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC132068.1-201ENST00000623805 459 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC092656.1-203ENST00000624134 423 ntBASIC5.86□□□□□ -1.47
MRE11P49959 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MRE11P49959 FP325313.1-201ENST00000638228 703 ntBASIC5.86□□□□□ -1.47
MRE11P49959 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 ZNF663P-202ENST00000641770 1131 ntBASIC5.86□□□□□ -1.47
MRE11P49959 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
MRE11P49959 SRRM1P3-201ENST00000426911 2678 ntBASIC5.86□□□□□ -1.47
MRE11P49959 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MRE11P49959 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 CASC19-281ENST00000642118 1554 ntBASIC5.85□□□□□ -1.47
MRE11P49959 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MRE11P49959 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
MRE11P49959 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.85□□□□□ -1.47
MRE11P49959 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms