Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CR1P49238 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CX3CR1P49238 RPS4XP9-201ENST00000405151 780 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 PGBD4P8-201ENST00000412993 562 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CR1P49238 CBX1P1-201ENST00000440184 427 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AL356535.1-201ENST00000440335 398 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 MTCYBP21-201ENST00000443300 1113 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CR1P49238 RSL24D1P2-201ENST00000445584 366 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CR1P49238 RPS29P22-201ENST00000472363 168 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 OR9N1P-202ENST00000494289 481 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC109458.1-201ENST00000508858 316 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CR1P49238 CBX3P2-202ENST00000583365 535 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC005255.1-201ENST00000593748 216 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AL451044.1-201ENST00000604867 238 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC245389.2-201ENST00000616023 576 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC243756.2-201ENST00000618406 463 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC242843.1-201ENST00000618702 573 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC104820.1-201ENST00000624183 307 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC073342.3-201ENST00000624211 193 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.62□□□□□ -1.83
CX3CR1P49238 AC139713.2-214ENST00000642059 1811 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CR1P49238 MTCO1P14-201ENST00000441695 1559 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 DCAF13P1-201ENST00000495256 1330 ntBASIC3.62□□□□□ -1.83
CX3CR1P49238 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CR1P49238 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CR1P49238 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CR1P49238 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CX3CR1P49238 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.61□□□□□ -1.83
CX3CR1P49238 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CR1P49238 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CX3CR1P49238 OR4K17-201ENST00000315543 1032 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RNU1-132P-201ENST00000364300 164 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 MTATP6P31-201ENST00000406985 692 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RNU4-25P-201ENST00000410569 230 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RN7SKP182-201ENST00000410772 298 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RPS20P25-201ENST00000412447 352 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 TCEA1P4-201ENST00000415066 844 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 RPS27AP7-201ENST00000422792 455 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 ELOCP6-201ENST00000429066 328 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC023347.2-201ENST00000433994 462 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AF228730.2-201ENST00000438784 848 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC114878.1-201ENST00000441166 358 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 XKRY2-201ENST00000442362 1093 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 ARL5AP2-201ENST00000444698 533 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 YWHAQP9-201ENST00000445891 512 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CR1P49238 AC009963.2-201ENST00000453431 138 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 ELOCP12-201ENST00000458706 328 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC096992.1-201ENST00000459808 709 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RPL37P6-202ENST00000464216 403 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC011276.1-201ENST00000469688 323 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CR1P49238 AC012170.1-201ENST00000495139 359 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC090071.1-201ENST00000507713 644 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 RN7SKP141-201ENST00000516167 338 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 SNORA31.13-201ENST00000516624 135 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CR1P49238 AC025260.1-201ENST00000548858 430 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CR1P49238 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CR1P49238 RPL23AP87-202ENST00000573039 466 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CR1P49238 AP003392.5-201ENST00000607857 415 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC078899.5-201ENST00000612475 178 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC090246.1-201ENST00000616499 426 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 AC095038.2-201ENST00000621464 1070 ntBASIC3.61□□□□□ -1.83
CX3CR1P49238 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CR1P49238 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms