Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC3P40938 AC017002.4-201ENST00000604721 1525 ntBASIC3.8□□□□□ -1.8
RFC3P40938 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.8□□□□□ -1.8
RFC3P40938 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RFC3P40938 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 OR11H4-201ENST00000315409 1082 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AC067945.1-201ENST00000342609 618 ntBASIC3.8□□□□□ -1.8
RFC3P40938 RN7SKP280-201ENST00000364196 304 ntBASIC3.8□□□□□ -1.8
RFC3P40938 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RFC3P40938 RNU6-31P-201ENST00000384388 108 ntBASIC3.8□□□□□ -1.8
RFC3P40938 MIR7-1-201ENST00000384871 110 ntBASIC3.8□□□□□ -1.8
RFC3P40938 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC3P40938 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AC013404.1-201ENST00000413068 249 ntBASIC3.8□□□□□ -1.8
RFC3P40938 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 AL161631.1-201ENST00000417933 486 ntBASIC3.8□□□□□ -1.8
RFC3P40938 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AL138785.1-201ENST00000425821 331 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC3P40938 RPS29P7-201ENST00000439662 171 ntBASIC3.8□□□□□ -1.8
RFC3P40938 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 RPL23AP12-201ENST00000467573 473 ntBASIC3.8□□□□□ -1.8
RFC3P40938 RN7SL604P-201ENST00000492589 296 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AC104164.2-201ENST00000496953 495 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC3P40938 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.8□□□□□ -1.8
RFC3P40938 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC3P40938 HMGB1P23-201ENST00000518743 568 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC3P40938 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.8□□□□□ -1.8
RFC3P40938 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.8□□□□□ -1.8
RFC3P40938 AC141257.3-201ENST00000572906 215 ntBASIC3.8□□□□□ -1.8
RFC3P40938 MIR4644-201ENST00000579929 84 ntBASIC3.8□□□□□ -1.8
RFC3P40938 AC007342.8-201ENST00000623278 678 ntBASIC3.8□□□□□ -1.8
RFC3P40938 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC3P40938 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RFC3P40938 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC3P40938 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
RFC3P40938 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RFC3P40938 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 RNU6-244P-201ENST00000391028 104 ntBASIC3.79□□□□□ -1.8
RFC3P40938 PPIAP31-201ENST00000405422 495 ntBASIC3.79□□□□□ -1.8
RFC3P40938 RPL31P52-201ENST00000407532 367 ntBASIC3.79□□□□□ -1.8
RFC3P40938 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC3P40938 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.79□□□□□ -1.8
RFC3P40938 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC3P40938 RNF19BPX-201ENST00000426224 625 ntBASIC3.79□□□□□ -1.8
RFC3P40938 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC3P40938 RPL21P89-201ENST00000444021 467 ntBASIC3.79□□□□□ -1.8
RFC3P40938 HMGB3P22-202ENST00000451823 572 ntBASIC3.79□□□□□ -1.8
RFC3P40938 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RFC3P40938 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC3P40938 AC108064.1-201ENST00000513791 460 ntBASIC3.79□□□□□ -1.8
RFC3P40938 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.79□□□□□ -1.8
RFC3P40938 UBTFL9-201ENST00000534504 1148 ntBASIC3.79□□□□□ -1.8
RFC3P40938 TRAV11-201ENST00000539512 339 ntBASIC3.79□□□□□ -1.8
RFC3P40938 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.79□□□□□ -1.8
RFC3P40938 CBX3P5-201ENST00000552017 521 ntBASIC3.79□□□□□ -1.8
RFC3P40938 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.79□□□□□ -1.8
RFC3P40938 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC3P40938 AL049844.2-201ENST00000604280 628 ntBASIC3.79□□□□□ -1.8
RFC3P40938 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.79□□□□□ -1.8
RFC3P40938 AL031666.3-201ENST00000609320 1006 ntBASIC3.79□□□□□ -1.8
RFC3P40938 AC243654.2-201ENST00000612843 443 ntBASIC3.79□□□□□ -1.8
RFC3P40938 AC011472.4-201ENST00000615848 491 ntBASIC3.79□□□□□ -1.8
RFC3P40938 AL118496.1-201ENST00000440201 1812 ntBASIC3.79□□□□□ -1.8
RFC3P40938 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.79□□□□□ -1.8
RFC3P40938 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC3P40938 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFC3P40938 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RFC3P40938 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.78□□□□□ -1.8
RFC3P40938 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
RFC3P40938 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RFC3P40938 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 RN7SKP44-201ENST00000363602 316 ntBASIC3.78□□□□□ -1.8
RFC3P40938 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.78□□□□□ -1.8
RFC3P40938 RPL32P23-201ENST00000397237 405 ntBASIC3.78□□□□□ -1.8
RFC3P40938 DHFRP5-201ENST00000406944 564 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.78□□□□□ -1.8
RFC3P40938 XKRYP6-201ENST00000440468 1116 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms